Pairwise Alignments

Query, 261 a.a., flagellar L-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., flagellar basal body L-ring protein (RefSeq) from Shewanella loihica PV-4

 Score =  198 bits (504), Expect = 7e-56
 Identities = 101/196 (51%), Positives = 138/196 (70%), Gaps = 1/196 (0%)

Query: 62  PVAGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKAA 121
           P+A DP +AP++P+  P   AA TGS++  + +SS+Y D K   VGDIITV L ESTKA 
Sbjct: 33  PIADDPYYAPVYPEAPPTKIAA-TGSMYQDSQASSLYSDIKALKVGDIITVILQESTKAK 91

Query: 122 KSADADLNKKNDASMDPLAVGGKDLTIGDYNFSYALKNDNKFSGSAAANQSNSMSGSITV 181
           KSA+ +L K +D ++DP+  GG ++TI         K+       + A+QSNS+SGSI+ 
Sbjct: 92  KSANNELKKGSDLTLDPIYAGGGNVTISGSPIDLRYKDSMNTKRESDADQSNSLSGSISA 151

Query: 182 EVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSGT 241
            V++VL NGNLVIRGEKW+T+N GDE++RL+G +R  DI  DNTI S R++NARIQYSGT
Sbjct: 152 NVMQVLNNGNLVIRGEKWITINNGDEFVRLTGIVRSQDIRPDNTIDSQRVANARIQYSGT 211

Query: 242 GTNQDMQEPGFLARFF 257
           GT  D Q+ G+L++FF
Sbjct: 212 GTFADAQKVGWLSQFF 227