Pairwise Alignments

Query, 261 a.a., flagellar L-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., flagellar L-ring protein from Herbaspirillum seropedicae SmR1

 Score = 91.7 bits (226), Expect = 1e-23
 Identities = 65/217 (29%), Positives = 110/217 (50%), Gaps = 17/217 (7%)

Query: 50  SGLTDALRNRTDPVAGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDI 109
           + L  A  +    V G  +  P +     E+     G++F + SS+ ++++     VGDI
Sbjct: 14  AALLSACNSPAPMVIGPTSVRPAYQVANVEN----NGAIFRV-SSAQLFEEPTAYNVGDI 68

Query: 110 ITVTLNESTKAAKSA------DADLNKKNDASMDPLAVGGKDLTIGDYNFSYALKNDNKF 163
           I + ++ES  ++  A      D+ L +K   S  PL  GG    + D N  Y+   +N F
Sbjct: 69  IKIDISESISSSNKAATNNSRDSSLTQKGPGSGAPL--GGLFTQLYDAN--YSASGNNTF 124

Query: 164 SGSAAANQSNSMSGSITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFD 223
            GS  ++ +N+MSG++ V ++EVL N NLV+ GEK + +N     +R SG +R  DI   
Sbjct: 125 KGSGDSSNTNTMSGTLMVSIVEVLPNRNLVVAGEKRIGVNGNINTLRFSGVVRTRDIR-G 183

Query: 224 NTIASNRISNARIQYSGTGTNQDMQEPG-FLARFFNV 259
             +AS+ +++AR++  G G+  D    G F  R   +
Sbjct: 184 GIVASSNVADARLEQVGGGSIADASTDGNFFRRLLTI 220