Pairwise Alignments

Query, 361 a.a., flagellar P-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., flagellar basal body P-ring protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  463 bits (1192), Expect = e-135
 Identities = 229/362 (63%), Positives = 287/362 (79%), Gaps = 3/362 (0%)

Query: 3   KFTILL---MLLLASSAQAARIKDVAQVAGVRNNQLVGYGLVTGLPGTGESTPFTDQSFN 59
           K  +LL   +L +    +A RIKD+A V GVR+NQL+GYGLV GLPGTGE   +T+Q+F 
Sbjct: 2   KIKVLLAVALLAMTVPVKAERIKDIAAVQGVRSNQLIGYGLVVGLPGTGEKANYTEQTFT 61

Query: 60  AMLQSFGIQLPPGTKPKTKNVAAVIVTADLPAFSKQGQTIDITVSSIGSAKSLRGGTLMQ 119
            ML++FGI LP   KPK KNVA V V AD+P F K GQT+D+TVSSIG AKSLRGGTL+Q
Sbjct: 62  TMLKNFGINLPTNVKPKIKNVAVVAVHADMPPFIKPGQTLDVTVSSIGEAKSLRGGTLLQ 121

Query: 120 TFLKGLDGQVYAVAQGNLVVSGFSATGADGSKIVGNNPTVGMISSGAIVEREVPNPFGRG 179
           TFLKG+DG +YA+AQG++VVSGFSA G DGSK++ N PTVG I +GA+VER VP+ F  G
Sbjct: 122 TFLKGVDGNIYAIAQGSMVVSGFSAEGLDGSKVIQNTPTVGRIPNGALVERAVPSAFAHG 181

Query: 180 DYITFNLFESDFTTAQRLADAVNQFLGPQMASAVDAASIKVRAPRDLSQRVAFLSAIENL 239
           D++TFNL  +DF+TA+R+ADA+N  LGP+MA A+DAAS++V APRD SQRV+FL+ +EN+
Sbjct: 182 DFLTFNLHRADFSTAKRMADAINDLLGPEMARALDAASVQVYAPRDASQRVSFLATLENV 241

Query: 240 EFNPADSAAKIIVNSRTGTIVVGQNVRLKPAAVTHGGMTVAIKENLNVSQPNALGGGQTV 299
           E  PAD +AK+IVNSRTGTIVVGQNV+L PAAVTHGG+TV I EN  VSQPNAL GG TV
Sbjct: 242 EVEPADESAKVIVNSRTGTIVVGQNVKLLPAAVTHGGLTVTIAENQQVSQPNALAGGDTV 301

Query: 300 VVPNTEIEVTEKQGKMFKLEPGVTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQLI 359
           V   + I+ ++   +MF   PG +LD+LVRAVN VGAAPSD++AIL+ALK AGA+ G+LI
Sbjct: 302 VTNQSTIDASQANSRMFLFNPGTSLDELVRAVNLVGAAPSDVLAILEALKMAGALHGELI 361

Query: 360 II 361
           +I
Sbjct: 362 VI 363