Pairwise Alignments

Query, 361 a.a., flagellar P-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., flagellar basal body P-ring protein (RefSeq) from Shewanella sp. ANA-3

 Score =  467 bits (1202), Expect = e-136
 Identities = 235/360 (65%), Positives = 285/360 (79%)

Query: 2   RKFTILLMLLLASSAQAARIKDVAQVAGVRNNQLVGYGLVTGLPGTGESTPFTDQSFNAM 61
           R    L ML+L+  +QA RIKD+A V GVR+NQL+GYGLV GLPGTGE T +T+Q+F  M
Sbjct: 4   RLIVALAMLVLSLPSQAERIKDIANVQGVRSNQLIGYGLVVGLPGTGEKTNYTEQTFTTM 63

Query: 62  LQSFGIQLPPGTKPKTKNVAAVIVTADLPAFSKQGQTIDITVSSIGSAKSLRGGTLMQTF 121
           L++FGI LP   +PK KNVA V V AD+PAF K GQ +D+TVSS+G AKSLRGGTL+QTF
Sbjct: 64  LKNFGINLPDNFRPKIKNVAVVAVHADMPAFIKPGQQLDVTVSSLGEAKSLRGGTLLQTF 123

Query: 122 LKGLDGQVYAVAQGNLVVSGFSATGADGSKIVGNNPTVGMISSGAIVEREVPNPFGRGDY 181
           LKG+DG VYA+AQG+LVVSGFSA G DGSK++ N PTVG I +GAIVER V  PF  GDY
Sbjct: 124 LKGVDGNVYAIAQGSLVVSGFSAEGLDGSKVIQNTPTVGRIPNGAIVERSVATPFSSGDY 183

Query: 182 ITFNLFESDFTTAQRLADAVNQFLGPQMASAVDAASIKVRAPRDLSQRVAFLSAIENLEF 241
           +TFNL  +DF+TAQR+ADA+N  LGP MA  +DA S++V APRD+SQRV+FL+ +ENL+ 
Sbjct: 184 LTFNLRRADFSTAQRMADAINDLLGPDMARPLDATSVQVSAPRDVSQRVSFLATLENLDV 243

Query: 242 NPADSAAKIIVNSRTGTIVVGQNVRLKPAAVTHGGMTVAIKENLNVSQPNALGGGQTVVV 301
            PA+ +AK+IVNSRTGTIVVGQ+V+L PAAVTHGG+TV I E   VSQPNAL  G+TVV 
Sbjct: 244 IPAEESAKVIVNSRTGTIVVGQHVKLLPAAVTHGGLTVTIAEATQVSQPNALANGETVVT 303

Query: 302 PNTEIEVTEKQGKMFKLEPGVTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQLIII 361
            NT I V E   +MF   PG TLD+LVRAVN VGAAPSD++AIL+ALK AGA+ G+LIII
Sbjct: 304 ANTTIGVNESDRRMFMFSPGTTLDELVRAVNLVGAAPSDVLAILEALKVAGALHGELIII 363