Pairwise Alignments

Query, 312 a.a., flagellar assembly peptidoglycan hydrolase FlgJ from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  133 bits (335), Expect = 7e-36
 Identities = 66/150 (44%), Positives = 93/150 (62%), Gaps = 1/150 (0%)

Query: 158 FDSRHSFVTKLKPYADKAARMLGVDSSLLIAQAALETGWGQKMVKNARGNSN-NLFNIKA 216
           F     FV  + P A +AA  +GVD   L+AQAALETGWG+ +++   G+S+ NLF IKA
Sbjct: 270 FRDADEFVNAMLPMAKEAADRIGVDPRYLVAQAALETGWGKSVMRQPDGSSSHNLFGIKA 329

Query: 217 DRSWQGDKVATQTLEYHNNVPVVEKAAFRSYASFDESFNDYVRFLENNPRYTNALDHGGN 276
             +W+GD     T E+ N   V E A FRSYAS+ +SF+D V  L++N RY + L     
Sbjct: 330 SANWKGDSARAITSEFRNGAMVKETAEFRSYASYRDSFHDLVNLLQSNSRYQDVLKSADK 389

Query: 277 SERFIHGIHRAGYATDPQYADKVLRVKAQI 306
            E+F+  + +AGYATDP YA+K+  +  Q+
Sbjct: 390 PEQFVRELQKAGYATDPNYANKISNIARQM 419



 Score = 57.8 bits (138), Expect = 5e-13
 Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 15/131 (11%)

Query: 5   SNDIGFIQDIAGLDKLRQKAVNGDENAGQSALTAAARQFESIFTSMMLKSMRDANSDF-K 63
           S D     D+  L++L+    N D N     L   A++FES+F   MLKSMR A     K
Sbjct: 11  SGDSASYSDLNRLNQLKVGDKNSDGN-----LRKVAQEFESLFIGEMLKSMRSATEVLGK 65

Query: 64  SDLMSSQNEDLYRQMLDEQMASEFS-SSGSLGLADMIVAQLSTGQ--------TASEQKG 114
            + M++     Y++M D+Q+A   S   G +GLAD+++ Q+S  +        T S  K 
Sbjct: 66  DNPMNTPEAKQYQEMYDQQLAVSMSREGGGIGLADVLLRQMSKNKPTAPGEAATLSAAKQ 125

Query: 115 EDGFQEAMRRV 125
           +D   +  +RV
Sbjct: 126 QDALDKVAKRV 136