Pairwise Alignments

Query, 312 a.a., flagellar assembly peptidoglycan hydrolase FlgJ from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., flagellar biosynthesis protein FlgJ from Pseudomonas fluorescens FW300-N2E3

 Score =  133 bits (335), Expect = 7e-36
 Identities = 68/150 (45%), Positives = 93/150 (62%), Gaps = 1/150 (0%)

Query: 158 FDSRHSFVTKLKPYADKAARMLGVDSSLLIAQAALETGWGQKMVKNARGNSN-NLFNIKA 216
           F S   FV  + P A +AA  +GVD   L+AQAALETGWG+ +++   G+S+ NLF IKA
Sbjct: 266 FSSADEFVNTMMPMAKEAADRIGVDPRYLVAQAALETGWGKSVMRAQDGSSSHNLFGIKA 325

Query: 217 DRSWQGDKVATQTLEYHNNVPVVEKAAFRSYASFDESFNDYVRFLENNPRYTNALDHGGN 276
             SW GD     T E+ N   V E A FRSYAS+ +SF+D V  L+ N RY + +    N
Sbjct: 326 GSSWTGDSARAITSEFRNGEMVKETAEFRSYASYKDSFHDLVTLLQTNNRYQDVVKSADN 385

Query: 277 SERFIHGIHRAGYATDPQYADKVLRVKAQI 306
            E+F+  + +AGYATDP YA K+ ++  Q+
Sbjct: 386 PEQFVRELQKAGYATDPGYARKISQIAKQM 415



 Score = 55.1 bits (131), Expect = 3e-12
 Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 7/103 (6%)

Query: 4   NSNDIGFIQDIAGLDKLRQKAVNGDENAGQSALTAAARQFESIFTSMMLKSMRDANSDF- 62
           +S D G   D+  L++L+    N D N     +   A++FES+F   MLKSMR A     
Sbjct: 10  SSGDSGSYSDLNRLNQLKVGDKNSDAN-----MRKVAQEFESLFLGEMLKSMRSATETLG 64

Query: 63  KSDLMSSQNEDLYRQMLDEQMASEFSSSG-SLGLADMIVAQLS 104
           K + +++     Y++M D+Q+A   S  G  +GLAD+++ Q+S
Sbjct: 65  KDNPLNTPAAKQYQEMYDQQLAVSMSRQGHGIGLADVLMRQMS 107