Pairwise Alignments

Query, 312 a.a., flagellar assembly peptidoglycan hydrolase FlgJ from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., flagellar rod assembly protein/muramidase FlgJ from Pseudomonas stutzeri RCH2

 Score =  172 bits (435), Expect = 2e-47
 Identities = 125/350 (35%), Positives = 176/350 (50%), Gaps = 66/350 (18%)

Query: 17  LDKLRQKAVNGDENAGQSALTAAARQFESIFTSMMLKSMRDANSDF-KSDLMSSQNEDLY 75
           L++L Q  V  D + G+  +   A++FES+F + MLKSMR A     K + ++SQ    Y
Sbjct: 20  LNRLSQLKVGKDRD-GEENVRKVAQEFESLFLNEMLKSMRAATEVLAKDNPLNSQASKQY 78

Query: 76  RQMLDEQMASEFSSSGS-LGLADMIVAQLS-----------------TGQTASEQKGEDG 117
           + M D+Q++   S  G  +GLAD++V QLS                 T   A   K   G
Sbjct: 79  QDMYDQQLSVSLSKEGGGIGLADVLVRQLSKQTETVTRNNPFAQVAQTEGAAWPSKPAAG 138

Query: 118 FQEAM--RRVEHARKTA-----SERSNEDLVA--------AVYPLRKTQ----------- 151
            + A    R+ + R+ A     SER   ++ A        AV PL               
Sbjct: 139 VESARDDSRLLNQRRLALPGKLSERQVANVSATAVPPAGDAVQPLVNVDWKPATAFVPPA 198

Query: 152 ---------------AVQSTQFDSRHSFVTKLKPYADKAARMLGVDSSLLIAQAALETGW 196
                          A   T+F S   F+  + P A+KAA  LG++   L+AQAALETGW
Sbjct: 199 DKPLTINGVEKGAPNAPSKTRFSSSQEFIATMLPMAEKAAERLGIEPRFLVAQAALETGW 258

Query: 197 GQKMVKNARG-NSNNLFNIKADRSWQGDKVATQTLEYHNNVPVVEKAAFRSYASFDESFN 255
           G+ M++   G NS+NLF IKA   W+G      T EY N     EKA FR+Y SF++SF+
Sbjct: 259 GKSMIRQKDGSNSHNLFGIKA-TGWKGASATVTTTEYVNGKATREKAGFRAYDSFEQSFD 317

Query: 256 DYVRFLENNPRYTNAL---DHGGNSERFIHGIHRAGYATDPQYADKVLRV 302
           D+V  LENN RY  A+    + G+SERF+  + +AGYATDPQYA K+ ++
Sbjct: 318 DFVSLLENNDRYRTAIQVASNTGDSERFVKELQKAGYATDPQYARKISQI 367