Pairwise Alignments

Query, 312 a.a., flagellar assembly peptidoglycan hydrolase FlgJ from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., flagellar rod assembly protein/muramidase FlgJ (RefSeq) from Shewanella sp. ANA-3

 Score =  154 bits (390), Expect = 2e-42
 Identities = 78/162 (48%), Positives = 107/162 (66%), Gaps = 3/162 (1%)

Query: 148 RKTQAVQSTQFDSRHSFVTKLKPYADKAARMLGVDSSLLIAQAALETGWGQKMVKNARGN 207
           R+TQ  ++ +F SR  F+  L P+A+KAA+ LG    +L+AQ+ALETGWGQK+V+ + G 
Sbjct: 219 RETQ--KTLKFGSREEFLATLYPHAEKAAKALGTQPEVLLAQSALETGWGQKIVRGSNGA 276

Query: 208 -SNNLFNIKADRSWQGDKVATQTLEYHNNVPVVEKAAFRSYASFDESFNDYVRFLENNPR 266
            S+NLFNIKADR W GDK    TLE+   + V +KA FR Y  F+ SFND+V F+    R
Sbjct: 277 PSHNLFNIKADRRWLGDKANVSTLEFEQGIAVRQKADFRVYTDFEHSFNDFVTFIAEGER 336

Query: 267 YTNALDHGGNSERFIHGIHRAGYATDPQYADKVLRVKAQIDQ 308
           Y +A     +  +FI  +  AGYATDP+YA+KV++V   I Q
Sbjct: 337 YQDAKKVAASPTQFIRALQDAGYATDPKYAEKVIKVMQTISQ 378



 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 8/175 (4%)

Query: 13  DIAGLDKLRQKAVNGDENAGQSALTAAARQFESIFTSMMLKSMRDANSDFKSDL-MSSQN 71
           D+ GLD LR +A   ++      L   A+QFE IF  M++KSMRDAN+ F+SD  ++SQ 
Sbjct: 12  DLGGLDSLRAQAQKDEKGT----LKQVAQQFEGIFVQMLMKSMRDANAVFESDSPLNSQY 67

Query: 72  EDLYRQMLDEQMASEFSSSGSLGLADMIVAQL---STGQTASEQKGEDGFQEAMRRVEHA 128
              Y QM D+Q++ + S  G LGLADM+V QL   S+    +     DG ++ ++  +  
Sbjct: 68  TKFYEQMRDQQLSVDLSDKGVLGLADMMVQQLSPESSQHIPASVLRSDGGEKLLQGDKAL 127

Query: 129 RKTASERSNEDLVAAVYPLRKTQAVQSTQFDSRHSFVTKLKPYADKAARMLGVDS 183
              A   + +D++ A      T A  S    +     T      D  A  L +D+
Sbjct: 128 SVPAQNTATQDVLNASATTASTSASTSAGIPAYIVRPTFESDRPDDVASSLDIDT 182