Pairwise Alignments

Query, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., flagellar hook-associated protein FlgK from Phaeobacter inhibens DSM 17395

 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 32/259 (12%)

Query: 6   LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65
           LN     +  A R  +    N+SNV T GYSR+S+   T+A   + G   G   HV+ + 
Sbjct: 7   LNSAMTGLTAAGRSTSVVSENLSNVLTPGYSRRSLAL-TSAGDGFSGVKVG---HVQRIN 62

Query: 66  RSWDQFAVK----ELNIASTDYAFKRDTEENLDMLSKLLSSVASK-KIPENLNEWFDSVK 120
               Q +V+    E+ +A    AF          +++L+ S      I + L + FDS  
Sbjct: 63  DPALQSSVRSANSEVGVAEVKSAF-------FGRMTELVGSADDPYSITQRLTD-FDSGL 114

Query: 121 SLADSPNDLGAR--KVVLEKSKLISQNLNDFHETVRLQKDITNKGLALGVERINQLALEI 178
               S  D G R   + ++  +L+ +++ D  E +R Q+   ++ + + V+ +NQ    +
Sbjct: 115 IEVISRPDSGPRLNDLAIQAEELV-RSIADAAEGLRNQRTAADRAIDVQVDTVNQ---SL 170

Query: 179 RDLQRLMMRVP------GPHNDLMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHT 232
             LQ+L  ++            L+D+ + L+ E+++   V V  R  G+   +    G  
Sbjct: 171 EKLQKLNAKIAISQSTGSDSASLLDQRDLLIDEVNKIIPVKVVNRDRGQ-VALFSEGGAV 229

Query: 233 LVSGTEASQLRVIDGFPDT 251
           L+ G +A++L   DG  DT
Sbjct: 230 LLDG-QAAELS-FDGKADT 246