Pairwise Alignments

Query, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., flagellar hook-associated protein FlgK (RefSeq) from Shewanella loihica PV-4

 Score =  315 bits (808), Expect = 3e-90
 Identities = 204/640 (31%), Positives = 320/640 (50%), Gaps = 23/640 (3%)

Query: 1   MASDLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVH 60
           M+ DLLN+    VL +Q QL  T +NI+N NT+GY RQ   Q +   ++ G   YG G +
Sbjct: 1   MSMDLLNIARTGVLASQSQLAVTSNNITNANTQGYHRQVAEQSSLESQRLGNSFYGAGTY 60

Query: 61  VENVRRSWDQFAVKELNIASTDYAFKRDTEENLDMLSKLLSSVASKKIPENLNEWFDSVK 120
           + +V+R ++++A +EL I  T  +  + T+  +  L +L S +  K +P++LN+ F  + 
Sbjct: 61  ITDVKRIYNEYAARELRIGQTALSQAQTTQTKMSELDQLFSQIG-KAVPQSLNDLFAGLN 119

Query: 121 SLADSPNDLGARKVVLEKSKLISQNLNDFHETVRLQKDITNKGLALGVERINQLALEIRD 180
           SLAD P+D+G R  +L  +  I++ LN     +  Q   TN  ++   +RIN+++ E+  
Sbjct: 120 SLADLPDDMGIRGSLLGNADQIAKALNQMQSQLDGQMKQTNDQISAMTDRINEISTELGH 179

Query: 181 LQRLMMRVPGPHNDLMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHTLVSGTEAS 240
           + + +M+  G    L+DK + L+ ELS+Y +V V   + G   +I +G    LVSG  + 
Sbjct: 180 INQELMKSQGADMQLLDKQDALIQELSEYAQVNVIPLESGAK-SIMLGGAVMLVSGEVSM 238

Query: 241 QLRVIDGFPDTQQHRLAMVEGKALKAISARDIGGKMEAILDMRDEHIPYLMDEVGRLALS 300
           Q+    G P   + R+    G     +    +GG + A+   RDE +     E+G+LAL 
Sbjct: 239 QMGATTGDPYPGELRITTTAGNQTLVVDPSKMGGSLGALFQFRDETLIPAQLEMGQLALG 298

Query: 301 FSHEVNTLQSQGLDLRGNVGSALFTDVNLDV--IARSRVVTNSNSKADMAVFIEDVSQLK 358
            +   N  QSQG DL G VGS LF D+N     + R+    N+   A + V I+DV+ L 
Sbjct: 299 IADSFNQAQSQGFDLNGEVGSDLFLDINDPAMSVGRAGAYGNNTGNAALRVNIDDVNALS 358

Query: 359 GGEYSMQYNGSEFVVTLPSGQQTVLPVVKGNVYV---DGLRVEVRNPPQV-GERILVRPT 414
           GG Y + +              TV P+      +   DG  + + +     G+R  +RPT
Sbjct: 359 GGSYELTFTAPATYELRDQETGTVTPLTLNGSQLTGGDGFSINIDSGAMASGDRFEIRPT 418

Query: 415 RNGAAAIRLATEDATKIAAQSFEASTTFAQ-GKAKFKILQ-----------AGDVREFEV 462
              AA I++   D   IAA + + +   A  G  + K++             G    FE+
Sbjct: 419 SGAAAGIKVVMTDPKGIAAAAPKITQDAANSGNTQVKLVSIDNRSVANFPLTGSELTFEI 478

Query: 463 IVSPTGDQFAVTDTKGNILLQPQPYPPTGPVTVLGTTFELTEGALPNDKFTANLVPSEGD 522
               T + F V D  GN L  P  + P   ++  G TFE+   A   D+FT +L  +EGD
Sbjct: 479 --DTTANTFEVFDAAGNSLGAPTAFTPPS-ISAYGFTFEVDASAPATDRFTFDLSFAEGD 535

Query: 523 NGNLRKMINIQTAKRMNDNESTIIDLYHNLNTDVGLKMATMTRLTDVARLEKEAAQSRIA 582
           N N   M  +   K MN+  ST+ D+Y      VG K          A      A +R+ 
Sbjct: 536 NTNAVAMAKLAETKLMNNGGSTLADVYEGTKLQVGGKAKAAEVAFGSAEAVYSQAYTRVQ 595

Query: 583 SISGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTILA 622
           S SGVNLDEEAAN+M+FQQ+Y AS+RI+  + + F+T+ +
Sbjct: 596 SESGVNLDEEAANLMRFQQSYQASARIMTTATEIFDTLFS 635