Pairwise Alignments

Query, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., hypothetical flagellar hook-associated protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  205 bits (522), Expect = 3e-57
 Identities = 124/368 (33%), Positives = 195/368 (52%), Gaps = 4/368 (1%)

Query: 1   MASDLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVH 60
           MA DLLN+    VL +Q QL  T +NI+N NT GY RQ   Q T   ++ G   YG G +
Sbjct: 1   MAIDLLNIARTGVLASQSQLGVTSNNIANANTVGYHRQVATQTTLDSQRLGSSFYGTGTY 60

Query: 61  VENVRRSWDQFAVKELNIASTDYAFKRDTEENLDMLSKLLSSVASKKIPENLNEWFDSVK 120
           V +V+R ++ +A +EL I  T  +    +   L  L ++ S +  K +P++L + F  + 
Sbjct: 61  VSDVKRIYNDYAARELRIGQTTLSAAEASYGKLSELDQIFSQIG-KVVPQSLTDLFAGLN 119

Query: 121 SLADSPNDLGARKVVLEKSKLISQNLNDFHETVRLQKDITNKGLALGVERINQLALEIRD 180
           SLAD P DLG R   L  +K ++ +LN    T+  Q + TN  +    +RIN+++ E+ +
Sbjct: 120 SLADLPADLGIRSSTLNDAKQLANSLNQMQSTLNGQLNQTNDQITGMTKRINEISTELAN 179

Query: 181 LQRLMMRVPGPHNDLMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHTLVSGTEAS 240
           L   +M+ P     L+DK + LV ELSQY +V V   ++G   +I +G    LVSG  A 
Sbjct: 180 LNLELMKSPNQDPILLDKQDALVQELSQYAQVNVIPLENG-AKSIMLGGSIMLVSGEVAM 238

Query: 241 QLRVIDGFPDTQQHRLAMVEGKALKAISARDIGGKMEAILDMRDEHIPYLMDEVGRLALS 300
            +    G P   + +L    G          +GG++ A+ + RD+ +     E+ +LAL 
Sbjct: 239 SMSTATGDPFPNELQLMSSIGSQSVKADPSKLGGQLGALFEYRDQTLVPASLELDQLALG 298

Query: 301 FSHEVNTLQSQGLDLRGNVGSALFTDVNLDVIARSRV--VTNSNSKADMAVFIEDVSQLK 358
            +   N LQ+QG DL G VG+ +F D+N  +++  RV   T++   A + V I+D S L 
Sbjct: 299 VADSFNKLQAQGFDLNGQVGANMFKDINDPLMSLGRVGGFTDNTGNATLGVNIDDTSALT 358

Query: 359 GGEYSMQY 366
           GG Y + +
Sbjct: 359 GGSYELSF 366