Pairwise Alignments

Query, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

Subject, 641 a.a., flagellar hook-associated protein FlgK (RefSeq) from Shewanella sp. ANA-3

 Score =  315 bits (806), Expect = 5e-90
 Identities = 204/640 (31%), Positives = 320/640 (50%), Gaps = 22/640 (3%)

Query: 1   MASDLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVH 60
           MA DLLN+    VL +Q QL  T +NI+N NT GY RQ   Q T   ++ G   YG G +
Sbjct: 1   MAIDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTY 60

Query: 61  VENVRRSWDQFAVKELNIASTDYAFKRDTEENLDMLSKLLSSVASKKIPENLNEWFDSVK 120
           V++V+R ++ +A +EL I  T  +    +   L  L +L S +  K +P++LN  F  + 
Sbjct: 61  VDDVKRIYNDYAARELRIGQTTLSGAEASYGKLSELDQLFSQIG-KMVPQSLNSLFTGLN 119

Query: 121 SLADSPNDLGARKVVLEKSKLISQNLNDFHETVRLQKDITNKGLALGVERINQLALEIRD 180
           SLAD P DLG R   L  +K ++ +LN    ++  Q   TN  +    +RIN+++ E+ +
Sbjct: 120 SLADLPADLGIRSSTLNDAKQLANSLNQMQSSLNGQMTQTNDQITGMTKRINEISKELAN 179

Query: 181 LQRLMMRVPGPHNDLMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHTLVSGTEAS 240
           L   +M+ P     L+DK + L+ ELSQY +V V  +++G   +I +G    LVSG  A 
Sbjct: 180 LNLELMKSPNQDAMLLDKQDALIQELSQYAQVNVIPQENGAK-SIMLGGSVMLVSGEIAM 238

Query: 241 QLRVIDGFPDTQQHRLAMVEGKALKAISARDIGGKMEAILDMRDEHIPYLMDEVGRLALS 300
            +    G P   + +L    G    A     +GG++ A+ + RD+ +     E+ +LAL 
Sbjct: 239 TMDTKTGDPFPNELQLTSSIGSQSVAADPSKLGGQLGALFEYRDQTLIPASHELDQLALG 298

Query: 301 FSHEVNTLQSQGLDLRGNVGSALFTDVNLDVIARSRV--VTNSNSKADMAVFIEDVSQLK 358
            +   N +Q+QG DL G VGS +F D+N  +++  RV   +N+   A + V I+D   L 
Sbjct: 299 IADNFNKMQAQGFDLNGQVGSNIFRDINDPLMSLGRVGGYSNNTGNATLGVNIDDTRLLT 358

Query: 359 GGEYSMQYNGSEFVVTLPSGQQTVLPVVKGNVYVDG---LRVEVRNPPQV-GERILVRPT 414
           GG Y + +          +    + P+      ++G     ++++      G+R ++RPT
Sbjct: 359 GGSYELSFTAPASYELRDTETGVITPLTLNGSTLEGGAGFSIDIKAGAMASGDRFVIRPT 418

Query: 415 RNGAAAIRLATEDATKIAAQSFEASTTFAQ-GKAKFKILQ-----------AGDVREFEV 462
              A  I +   D   IAA S + +   A  G  + K+ Q            G     ++
Sbjct: 419 AGAANGITVEMTDPKGIAAASPKITADAANSGNTQVKLTQITNRSAANFPITGSELTIQL 478

Query: 463 IVSPTGDQFAVTDTKGNILLQPQPYPPTGPVTVLGTTFEL-TEGALPNDKFTANLVPSEG 521
             +     +   D  G  L    PY P   ++  G TFE+ +  A  ND+FT NL  +EG
Sbjct: 479 DTTAIPPTYEAFDASGTSLGAAAPYTPPS-ISAFGFTFEVDSTAAASNDRFTFNLAFAEG 537

Query: 522 DNGNLRKMINIQTAKRMNDNESTIIDLYHNLNTDVGLKMATMTRLTDVARLEKEAAQSRI 581
           DN N   M  +  +K MN  +ST+ D++ N   D+G K          A    + A +R+
Sbjct: 538 DNSNAVAMAKLSESKVMNGGKSTLADVFENTKIDIGSKTKAAEVRVGSAEAIYQQAYARV 597

Query: 582 ASISGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621
            S SGVNLDEEAAN+M+FQQAY AS+RI+  +   F+T+L
Sbjct: 598 ESESGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLL 637