Pairwise Alignments

Query, 397 a.a., flagellar hook-associated protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., flagellar hook-associated protein FlgL (RefSeq) from Shewanella loihica PV-4

 Score =  196 bits (498), Expect = 1e-54
 Identities = 127/404 (31%), Positives = 197/404 (48%), Gaps = 19/404 (4%)

Query: 4   RISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQ 63
           RIS+   +    N +  ++S       Q+ASGK++ +A D+P+A   I N+ QQ   + Q
Sbjct: 2   RISTAQMFNQNINSVLNKQSATSKIIDQIASGKRVNTAGDDPVAAIGIDNLNQQNALVDQ 61

Query: 64  YLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMANNF 123
           ++  I    NRL   E  +   E  + S +  ++  +NGSLS  +R   A  L+      
Sbjct: 62  FMKNIDYATNRLALTESKLGTAETLTGSVREQILRAVNGSLSDSERQMIADELKGTLEEL 121

Query: 124 INLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNPGSK 183
           +++AN +DESGNY+FAG +  NQPF  +  GNV Y+GD   R+  +++ + +  N PG +
Sbjct: 122 VSVANTKDESGNYMFAGYETGNQPFAFNAAGNVVYSGDSGVRQAIVASGVTLGTNVPGDQ 181

Query: 184 VFMEIPNPFGSYEPNY-ALQEGSELLLERAVN---LNPDDTASYRVTFVDMPEGKNGYQL 239
            FM  P+  G +  NY + Q G   +L  A++      DDT S+ +         NG  L
Sbjct: 182 AFMNAPSGLGDFSANYLSTQTGDFRVLSAAISDPATYVDDTYSFTM---------NGANL 232

Query: 240 ERNGS----VVQAGEFDAKTGIQFEELNIQVKGQISKGDAIELTPRTTFSVFDTFRDAIR 295
           E   S    V     FDA   I F  + +++ GQ + GD   +TP++  SVFDT   AI 
Sbjct: 233 EIRDSSATLVTTVPNFDAANPINFNGIEVKLDGQPAPGDTFSITPQSQVSVFDTINQAIT 292

Query: 296 YAE--GSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLA 353
             E    V+     A+L Q++    +    L+  R + G  L  ++     H + K+  +
Sbjct: 293 LLEDPNKVNTPQGKAELAQMLNNIDSGVNQLSTARGEAGNSLKQIERYSSTHVEEKLVNS 352

Query: 354 KSKSTFEDLDYAEAVIEFNENSRALEASQKAFGKTKDLTLFNYI 397
            + S  EDLDYA A+ E  +   AL A    F K    TLF+YI
Sbjct: 353 SALSMLEDLDYASAITELEKQQLALNAVSSVFSKVGSTTLFDYI 396