Pairwise Alignments

Query, 397 a.a., flagellar hook-associated protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., flagellar hook-associated protein FlgL from Pantoea sp. MT58

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 17/263 (6%)

Query: 31  QLASGKKLLSASDNPLATHYIQNVGQQEEQLRQYLDAIVLVRNRLEHQEVIISNTEEFSD 90
           QL+SG+++ + SD+P+A      + Q ++Q +Q+  A       L  ++  +        
Sbjct: 29  QLSSGRRVTNPSDDPIAASRAVVLTQTQQQGKQFALARTFAEQGLSLEDNTLKGVTNGII 88

Query: 91  SAKRTVMEMINGSLSPEDRVARARVLQEMANNFINLANVQDESGNYIFAGTKPKNQPFFR 150
           +A+  ++    G+LS +DR + A  L+ +    +N AN +D +G YIFAG K  + PF  
Sbjct: 89  AAQGLIVNGSTGTLSDDDRGSIATQLEGIRAQLLNQANSKDANGRYIFAGYKTDSAPFVD 148

Query: 151 DNQGNVTYAGDDYQRKMKISNSLEIPFNNPGSKVFMEI-----PNPFGS-YEPNYALQEG 204
                V+Y G +     K+  S  +   + G  +FM I       P GS  E N      
Sbjct: 149 TAGTGVSYTGGNEAITQKVDTSRTMTVAHTGDSIFMSITGNATKEPDGSASETNVFTMLD 208

Query: 205 SELLLERAVNLNPDDTASYRVTFVDMPEGKN---GYQLERNGSVV-----QAGEFDAKTG 256
           S +   +    N D  A+ + TF D  +  N   G  L     VV     Q GE D    
Sbjct: 209 SAIAALKVPQDNAD--AATKQTFQDAMDKTNRGLGNALNNVSKVVSEIGTQLGEIDT-LN 265

Query: 257 IQFEELNIQVKGQISKGDAIELT 279
            Q ++ ++    Q+S    ++LT
Sbjct: 266 AQGDDRSVIYNSQMSDLVNVDLT 288



 Score = 38.1 bits (87), Expect = 4e-07
 Identities = 27/139 (19%), Positives = 61/139 (43%), Gaps = 5/139 (3%)

Query: 260 EELNIQVKGQISKGDAIELTPRTTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLVEEFH- 318
           + + + + G  +K      +    F++ D+   A++  + + +DA+        +++ + 
Sbjct: 180 DSIFMSITGNATKEPDGSASETNVFTMLDSAIAALKVPQDN-ADAATKQTFQDAMDKTNR 238

Query: 319 ---TAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLAKSKSTFEDLDYAEAVIEFNENS 375
               A  +++K  ++IG +L  +D    Q +D  +      S   ++D  EA   +    
Sbjct: 239 GLGNALNNVSKVVSEIGTQLGEIDTLNAQGDDRSVIYNSQMSDLVNVDLTEAASSYTMQQ 298

Query: 376 RALEASQKAFGKTKDLTLF 394
            AL+AS K F     ++LF
Sbjct: 299 TALQASYKTFTDMSKMSLF 317