Pairwise Alignments

Query, 345 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., integrase from Sinorhizobium meliloti 1021

 Score = 65.5 bits (158), Expect = 2e-15
 Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 21/170 (12%)

Query: 185 RLGGFESDGRSVSIPEIVLIAKICLA-------TGARISEALSLERSQISEFKLTFVETK 237
           RL   E+D   V   EI   +++ L        TGAR+ EA++L+ + I E + TF  TK
Sbjct: 138 RLRFLEADEEEVLFREIASRSELYLYLSIFLVDTGARLGEAIALKWNDIHEGRATFWVTK 197

Query: 238 GKRIRSVPISENLYKEIMLASSSSTKIFSTTYGSAHRYIKKALP---------DYVPEGQ 288
             R R+VP++      +   +  S   FS      +R +  A           D VP   
Sbjct: 198 SGRSRTVPLTVRAKDALKRVADRSPGPFSRIDQQKYRAVWNAAKVDAGLGNEDDLVP--- 254

Query: 289 ATHVLRHTFATHFMMNRGDILILQRILGHQKIEQTMAYAHFSPDHLIQAV 338
             H+LRHT A+  +    D+  +Q  LGHQ +E TM YAH +   L   V
Sbjct: 255 --HILRHTCASRLVRGGIDLRRVQMWLGHQTLEMTMRYAHLASHDLDMCV 302