Pairwise Alignments

Query, 345 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., tyrosine recombinase XerD from Dechlorosoma suillum PS

 Score = 53.1 bits (126), Expect = 9e-12
 Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 27/157 (17%)

Query: 204 IAKICLATGARISEALSLERSQISEFKLTFVET--KGKRIRSVPISENLY---------- 251
           + ++  ATG R+SE + L  +Q++   +  V T  KG + R VP+ E             
Sbjct: 138 LLEVLYATGFRVSELVGLTLTQLN-LDMGVVRTIGKGNKERLVPLGEISSDWLVRYLAES 196

Query: 252 KEIMLASSSSTKIFST------------TYGSAHRYIKK--ALPDYVPEGQATHVLRHTF 297
           + ++L   SS  +F T            T   A   IKK   L     +  + HVLRH F
Sbjct: 197 RPVLLKGRSSDGLFITGHQKKDNNDARMTRQMAWLLIKKYGELVGIPRDRISPHVLRHAF 256

Query: 298 ATHFMMNRGDILILQRILGHQKIEQTMAYAHFSPDHL 334
           ATH +    D+ I+Q +LGH  I  T  Y H + + L
Sbjct: 257 ATHLLNCGADLRIVQLLLGHADISTTQIYTHVARERL 293