Pairwise Alignments

Query, 861 a.a., replication endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 742 a.a., replication endonuclease from Pantoea sp. MT58

 Score =  338 bits (867), Expect = 7e-97
 Identities = 212/503 (42%), Positives = 265/503 (52%), Gaps = 83/503 (16%)

Query: 254 IMRMISDSWWLGRLVKVRKIMREHLAIAMGQVSNNASPYASWDCVREHQEQQQRNYEAIK 313
           IMRM ++ WW GRL +V    REHL IA+  VS   +PYAS   V E +EQ++R  E +K
Sbjct: 210 IMRMQTEKWWKGRLRRVAASWREHLQIALANVSKKHTPYASSMTVSEWREQKRRTREFLK 269

Query: 314 NMVLFDEETEEEHDLWDMVKKSVSNPAIRRHELMVRCRGCEDIGNELGLQGLFLTLTTPS 373
            M L DEE      L +    SV+NPAIRR ELM R RG E+I NE+G  G F TLT P+
Sbjct: 270 GMELEDEEGNRI-SLIEKYDGSVANPAIRRCELMTRIRGFENICNEMGFIGEFYTLTAPA 328

Query: 374 KYHNSYKKGGFIDHWNGASPRDAQAYLNKKWQLIRAKLNRDEIRWFGVRVAEPHHDGTPH 433
           +YH + K G     WNGASP D Q YL   WQ IRAKL+R+EIR FG+RVAEPHHD TPH
Sbjct: 329 RYHATIKTGHRNRKWNGASPADTQRYLCSVWQKIRAKLHREEIRIFGIRVAEPHHDATPH 388

Query: 434 WHLLIWVRKEDISAVRDTFITYATEEDRGELHPEFEKEKQKPFRKGVYVGPLDYRPRCDF 493
           WH+L+++R E    VR+    YA ++D  EL    +K ++  F                 
Sbjct: 389 WHMLMFMRPEQAERVREIMRDYAWQQDGSEL--TTDKARKARFHTEA------------- 433

Query: 494 GYIDPTKGTATGYIAKYISKNIDGYAMDGDISDETGKPVKDMARNVSAWKSRWSIRQFQF 553
             IDP KG+ATGY+AKYISKNIDGYA+DG+   E+GK +K+ A  VSAW +RW IRQFQF
Sbjct: 434 --IDPEKGSATGYVAKYISKNIDGYALDGETDAESGKDLKETASAVSAWAARWHIRQFQF 491

Query: 554 FGGAPVTTYRELRRLANQNKKAFMEYIFMQERADLISMYELLHYQLIGAFKPARVMTNQE 613
            GGAPVT YRELRR A+                                       T   
Sbjct: 492 VGGAPVTVYRELRRTADSE-------------------------------------TAHG 514

Query: 614 LVEVIAQSYEARAKTEIPHVAAVLRSADEGRWHGYIMNQGGPFVKRKELLVTNVYQELPF 673
           L    A +++A               AD G W GY+  QGGPFV+R EL V   YQ    
Sbjct: 515 LSVEFAAAHDA---------------ADAGDWAGYVNVQGGPFVRRDELAVRTWYQASED 559

Query: 674 ASPYAEAIRKLEGIATPE----QVIKTREKVWTIKRKGKETTEGEAVGFGSEATAFGGSA 729
            + Y E   +++G+   E      I TR   W I  K        AV    E       A
Sbjct: 560 MNEYGEETVRIKGVYATEVGNDTPILTRLMQWRIVPK-------RAVDLDFEFK--DAPA 610

Query: 730 ASRSSVNNCTDPFTGQVSTQLTR 752
           +SRSSVNNCT+P   + +   T+
Sbjct: 611 SSRSSVNNCTEPTGSEAAIDFTK 633