Pairwise Alignments

Query, 861 a.a., replication endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 803 a.a., bacteriophage replication gene A protein from Klebsiella michiganensis M5al

 Score =  232 bits (592), Expect = 6e-65
 Identities = 166/487 (34%), Positives = 232/487 (47%), Gaps = 73/487 (14%)

Query: 254 IMRMISDSWWLGRLVKVRKIMREHLAIAMGQVSNNASPYASWDCVREHQEQQQRNYEAIK 313
           + RM+   WW  +L ++R   RE    A+  V+  ASPY S++ V   +EQ++++ E  +
Sbjct: 275 LARMLCADWWYRKLWQMRCEWREEQLRAVCLVNRKASPYVSYEAVIHKREQRRKSLEFFQ 334

Query: 314 NMVLFDEETEEEHDLWDMVKKSVSNPAIRRHELMVRCRGCEDIGNELGLQGLFLTLTTPS 373
           +  L + + +   D+ D+V  S SNPA RR+E+M   +G E I    G   +F T+T PS
Sbjct: 335 SHELVNADGDTL-DMEDVVNASSSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPS 393

Query: 374 KYHNSYKKGGFIDHWNGASPRDAQAYLNKKWQLIRAKLNRDEIRWFGVRVAEPHHDGTPH 433
           ++H +   G     W   + R +  YL   +   R  +++  +RW+GVRVAEPHHDGT H
Sbjct: 394 RFHATLNNGRPNPKWTSETVRQSSDYLVDTFAAFRKAMHKAGLRWYGVRVAEPHHDGTVH 453

Query: 434 WHLLIWVRKEDISAVRDTFITYATEEDRGELHPEFEKEKQKPFRKGVYVGPLDYRPRCDF 493
           WHLL ++RK+D   +      +A  EDR EL              G   G     PR   
Sbjct: 454 WHLLCFMRKKDRRTLTALLRKFAIREDRAEL--------------GNNTG-----PRFKS 494

Query: 494 GYIDPTKGTATGYIAKYISKNIDGYAMDGDISDETGKPVKDMARNVSAWKSRWSIRQFQF 553
             I+P KGT T YIAKYISKNIDG  +  +IS ETGK ++D A +VSAW S   ++QF+F
Sbjct: 495 ELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGKSLRDSAEHVSAWASLHRVQQFRF 554

Query: 554 FGGAPVTTYRELRRLANQNKKAFMEYIFMQERADLISMYELLHYQLIGAFKPARVMTNQE 613
           FG      YRELR LA Q  +A  +                         K A V     
Sbjct: 555 FGIPGRQAYRELRLLAGQAARAQGD-------------------------KKAGVPV--- 586

Query: 614 LVEVIAQSYEARAKTEIPHVAAVLRSADEGRWHGYIMNQGGPFVKRKELLVTNVYQELPF 673
                          E P + AVL +AD G +  YIM QGG  V RK  L+   Y+    
Sbjct: 587 --------------LENPRLDAVLAAADVGCFATYIMKQGGVLVPRKNHLIRTAYELNDE 632

Query: 674 ASPYAEAIRKLEGIATP--EQVIKTREKVWTIKRKGKETTEGEAVGFGSEATAFGGSAAS 731
              Y +   ++ GI +P  E  I T    W + RK  +           EATA  G+ A 
Sbjct: 633 PGTYGDHGIRIYGIWSPIVEGRICTHAMKWKMVRKAVDV---------QEATADQGACAP 683

Query: 732 RSSVNNC 738
            +  NNC
Sbjct: 684 WTRGNNC 690