Pairwise Alignments

Query, 299 a.a., capsid protein from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., capsid scaffold-like protein from Klebsiella michiganensis M5al

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 22/262 (8%)

Query: 10  VATAGTTVSDGRVISESWINDMAELYDPEEYKALIWPEHYRSAWAVFEGKNWGEVEELKA 69
           +   G T +DGR I  +W+  MA  Y+P+ Y ALI  EH +        + +G V++L+A
Sbjct: 10  IGVEGAT-TDGRTIERAWLEQMAASYNPQVYTALINLEHIKGYTPDSPFRRFGTVDKLEA 68

Query: 70  -----GKFKDKLRLFAKLTPNHYLLEANKDGQKLFSSIEPEPDYKKEGRCYLLGLAVTDS 124
                G  K K+ L+A ++P+  L+   +  QKLF+S+E    +   G+ YL+GLA TD 
Sbjct: 69  EEIADGPLKGKMALYAWISPSDDLVAYTRKLQKLFTSMEVNTSFADTGKAYLVGLAATDD 128

Query: 125 PASSGTTRLRFSRV--------QGQYTELECSALEEWDLTPFYSQNAEFSKFFAMCRSFF 176
           PAS GT  L+FS          + Q  E   +A EE  +     Q+ + S F  +   F 
Sbjct: 129 PASLGTEMLQFSASAKSNPLAGRKQSPENLFTAAEETLIEWEEVQDDKPSLFARVTAMFA 188

Query: 177 NREQPNETNQPQSE-------DEEPMKQEQFDQMMGAIN-GIATKQNELESKFNTFSAQK 228
            + Q ++               E+    E+ D+ + A +  +A  +  L+ +   F+  +
Sbjct: 189 KKSQTDDARFSDVHRAVELVATEQQSLSERTDKSLSAQDKRLAALETSLQEQQTAFAELE 248

Query: 229 PETKGEEPEGDGKDKETNGMTP 250
            + + E+   D + +   G  P
Sbjct: 249 QQLQQEDSRKDYRQRAPGGNAP 270