Pairwise Alignments

Query, 336 a.a., phage major capsid protein, P2 family from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., major capsid protein from Klebsiella michiganensis M5al

 Score =  121 bits (304), Expect = 2e-32
 Identities = 98/333 (29%), Positives = 149/333 (44%), Gaps = 27/333 (8%)

Query: 5   LTQSAREYMDNFAQQLAKSYGVS--NVAELFNVSPQLETKLRAAITESAEFLKMITVTTV 62
           + +  R   + + QQLA+  GV    ++  F V P ++  L   I +SA FL MI +  V
Sbjct: 1   MKKKTRFAFNAYLQQLARLNGVEVEELSSKFTVEPSVQQTLEDQIQQSAAFLTMINIIGV 60

Query: 63  DQIEGQVVDVGVSGLYTG-------RKAGGRFTKQVGVGGHKYKLAETDSCAAITWAMLC 115
            +  GQ++ +GV     G        +     T  V V   +YK  +T+    +T+A L 
Sbjct: 61  TEQSGQLLGLGVGSTIAGTTDTTTKEREPTDPTVMVDV---EYKCEQTNFDTVLTYAKLD 117

Query: 116 QWANQGGRDQFMKHLTEFSNQMFALDIMRIGWNGVSAEADTDPSANPLGQDVNEGWIAFV 175
            WA       F   +     +  ALD + IG+NGV     ++   NPL QDVN+GW+  V
Sbjct: 118 LWAKF---QDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRVDNPLLQDVNKGWLQKV 174

Query: 176 KNRKASQVVDVDVYFDETN----------GDYRTLDAMASDIINNQIHPMFRNDPRLTVF 225
           +   A  V+      D T+          G Y  LDA+  D +N  I P+F++D  L V 
Sbjct: 175 REDAADCVMGSTTAEDGTSTADPVKVGKGGKYANLDALVMDAVNELIDPIFQDDADLVVI 234

Query: 226 VGSGLIGAAQAKLYDKADKPSEQIAAQKL--DKTIAGRPAYVPPFLPDNAMVVTIPENLQ 283
            G  L+      L +K  + SE++AA  +   K + G  A   P  P NA+++T  +NL 
Sbjct: 235 CGRELLSDKYFPLVNKEQENSEKLAADLIISQKRMGGLQAVRAPSFPANAVLITRLDNLS 294

Query: 284 VLTQHGTAQRKAKHESDRKQFENAYWRMEGYAV 316
           +  Q  T +R       R + EN     E Y V
Sbjct: 295 IYWQEDTRRRSVIDNPKRDRIENFESVNEAYVV 327