Pairwise Alignments

Query, 605 a.a., phage tail tape measure protein from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., conserved domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  120 bits (300), Expect = 1e-31
 Identities = 80/250 (32%), Positives = 126/250 (50%), Gaps = 16/250 (6%)

Query: 294 LLMADTQGLAASIDSLGQTKGMGKAEQMAAAMTDQSQRLEASWFAIRAAAFSMVLPAFNA 353
           L + D +    SI +LG+ +GM KA QMAA MTD   RL  +   + ++   ++LP    
Sbjct: 41  LFLLDFENAIYSI-TLGKVQGMDKARQMAARMTDVWGRLGGAINVVASSFGQVLLPPLEV 99

Query: 354 VTGSIADGLMWLTSMTSEYPVLTEVLSYAAIGALSLGGVVASLSLVMGIAKMMAGGWAVT 413
           + G I + L  L       P L   + Y A+ +++  GV+  ++ V GI K+        
Sbjct: 100 LDGHIVEVLGTLNRWIGIAPNLFRWIGYLAVASVTFAGVMGLVAAVTGIGKL-------- 151

Query: 414 TAVLSGVFKVLRISTIAMTAATWLFNAALWANPITWIIAGIVALVAAVGAMIYWWDEIKA 473
            A+++  F +L   T   TAA WL N+A  ANPITW++ G+++L+A +G  + WW  +KA
Sbjct: 152 -ALVAVAFGLLTKVTGLQTAAQWLLNSAFLANPITWVVLGVLSLIAELGDCLGWWAALKA 210

Query: 474 SFADTTWFKIIAAAIDGVIE----MLNMIPGINIEWRAGELPDVPVPETQPAIAKAVPVL 529
           +  DT W   +   +  VI     M N I G+ +   +G      +P+  P      P  
Sbjct: 211 ALGDTAWGNALVETVLAVIAPFRVMYNAIAGV-MGLFSGSASAPAMPDAAPGAPSVEPPA 269

Query: 530 PDVAALEASR 539
           P VA+LEA+R
Sbjct: 270 P-VASLEAAR 278