Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., flagellin protein from Sinorhizobium meliloti 1021

 Score = 70.9 bits (172), Expect = 5e-17
 Identities = 80/376 (21%), Positives = 141/376 (37%), Gaps = 64/376 (17%)

Query: 4   NVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGV 63
           ++ TN +AM A + L +  +  +++  R+SSGY++ +A D+AA   I+  +   +  L  
Sbjct: 3   SIMTNPAAMAALQTLRAINHNLETTQGRISSGYRVETAADNAAYWSIATTMRSDNAALST 62

Query: 64  AVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDEL 123
                  G +   T   AM     ++  M ++  +    S    D+  I +E+  L  +L
Sbjct: 63  VHDALGLGAAKVDTFYSAM---DTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQL 119

Query: 124 NRVAETTSFGG-NKLLNGTFA---TKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAA 179
           N  A++ SF G N L NG  A   TKS     +      + +  +  D A          
Sbjct: 120 NSAAQSASFSGENWLYNGASAALGTKSIVASFNRSADGSVTVSTLNYDTA---------- 169

Query: 180 NGKDKNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDE 239
                          + I + D   G +T ++NA   D ++   T       +I A    
Sbjct: 170 -------------KSVLIDVTDPARGMLTKAVNA---DALQSTPTGTARNYYLIDAGAAP 213

Query: 240 EGKLQLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALK 299
            G  ++  DN      AT G  L                          + +++VD  + 
Sbjct: 214 AGATEIEIDN------ATTGAQLG-------------------------DMISVVDELIS 242

Query: 300 YVDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASS 359
            +    A LGA  +R     + + N+ + ++    R+ D D  +E+T L   Q   Q   
Sbjct: 243 QLTDSAATLGAITSRIEMQESFVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLGI 302

Query: 360 SVLAQAKQAPNSALAL 375
             L+ A     + L L
Sbjct: 303 QSLSIANTTSENILRL 318