Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., flagellin A from Sinorhizobium meliloti 1021

 Score =  100 bits (249), Expect = 7e-26
 Identities = 100/403 (24%), Positives = 168/403 (41%), Gaps = 44/403 (10%)

Query: 4   NVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGV 63
           ++ TN SAM A   L S +++ + +  R+SSG ++ SA D+AA   I+  +   ++ L  
Sbjct: 3   SILTNNSAMAALSTLRSISSSMEDTQSRISSGLRVGSASDNAAYWSIATTMRSDNQALSA 62

Query: 64  AVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDEL 123
                  G +   TA   M+    +   ++++  +    +    D+  IQEEIT L D+L
Sbjct: 63  VQDALGLGAAKVDTAYSGMESAIEV---VKEIKAKLVAATEDGVDKAKIQEEITQLKDQL 119

Query: 124 NRVAETTSFGGNKL----LNGTFATKSFQIG--ADNGEAVMLNIKD--MRSDNALMG--- 172
             +AE  SF G       L+G   TKS   G   D+  AV +   D  + +D  L     
Sbjct: 120 TSIAEAASFSGENWLQADLSGGPVTKSVVGGFVRDSSGAVSVKKVDYSLNTDTVLFDTTG 179

Query: 173 -----GKTYQAA----------NGKDKNWGVEAGKTDLTITLKDKREGD-VTISINAKEG 216
                 K Y  +          NG    + V A   D  I      +GD   +   A  G
Sbjct: 180 NTGILDKVYNVSQASVTLPVNVNGTTSEYTVGAYNVDDLIDASATFDGDYANVGAGALAG 239

Query: 217 DDIEELATYINGQTDMIKA-SVDEEGKLQLFTDNNRIDGAATFGGALAGELGIGAAQDVT 275
           D       Y+  Q   +KA  V   G+  ++ D     G  T    + G      A   +
Sbjct: 240 D-------YVKVQGSWVKAVDVAATGQEVVYDDGTTKWGVDT---TVTGAPATNVAAPAS 289

Query: 276 VDTLDVT---TVGGAQESVAIVDAALKYVDSHRAELGAFQNRFNHAINNLDNINENVNAS 332
           + T+D+T     G     +A VD AL  + S  A LG+  +R +   + ++ +++++++ 
Sbjct: 290 IATIDITIAAQAGNLDALIAGVDEALTDMTSAAASLGSISSRIDLQSDFVNKLSDSIDSG 349

Query: 333 KSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALAL 375
             R+ D D  +E+T L   Q   Q +   L+ A     + L+L
Sbjct: 350 VGRLVDADMNEESTRLKALQTQQQLAIQALSIANSDSQNVLSL 392