Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., flagellin-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  175 bits (444), Expect = 1e-48
 Identities = 94/183 (51%), Positives = 124/183 (67%), Gaps = 1/183 (0%)

Query: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60
           MA+ VNTNV++M AQ+ LT +     +SMERLSSG +INSAKDDAAGL ISNRLN Q RG
Sbjct: 1   MAITVNTNVTSMKAQKNLTLSNRDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60

Query: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120
           L V +RNAND IS+AQ AEGAM+E TN+LQRMRDLS+Q+ NG+NS  D  +++ E+  L 
Sbjct: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLA 120

Query: 121 DELNRVAETTSFGGNKLLNGTFAT-KSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAA 179
            E+  +  TT+FG  KL+ G F+  K FQ+G  N E V + +K   +    +G      +
Sbjct: 121 LEITAIGNTTAFGDTKLMTGGFSNGKKFQVGHQNAEDVTVTVKTNNAGTLSVGALDVTTS 180

Query: 180 NGK 182
            G+
Sbjct: 181 GGR 183



 Score =  114 bits (284), Expect = 4e-30
 Identities = 70/180 (38%), Positives = 96/180 (53%), Gaps = 14/180 (7%)

Query: 209 ISINAKEGDDIEELATYINGQTDMIKASVDEEGKLQLFTDNNRIDGAATFGGALAGELGI 268
           +SI A+ G +  +  T +  + D +   +   G    F D   + G   F      ++G 
Sbjct: 95  LSIQAENGANSADDLTSLKNEMDQLALEITAIGNTTAFGDTKLMTGG--FSNGKKFQVGH 152

Query: 269 GAAQDVTVDT------------LDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNRFN 316
             A+DVTV              LDVTT GG   ++  +DAA+K +D+ RA LGA QNR  
Sbjct: 153 QNAEDVTVTVKTNNAGTLSVGALDVTTSGGRSTAMLKIDAAIKSIDTQRASLGAIQNRLA 212

Query: 317 HAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALALL 376
           H I+N  N   NV  +KSRI D DFAKET+ +TK Q+L Q  S++LAQA Q P  AL+LL
Sbjct: 213 HNISNSANTQANVADAKSRIVDVDFAKETSTMTKNQVLQQTGSAMLAQANQLPQIALSLL 272