Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., flagellin/flagellar hook associated protein from Dechlorosoma suillum PS

 Score =  144 bits (364), Expect = 2e-39
 Identities = 85/217 (39%), Positives = 128/217 (58%), Gaps = 13/217 (5%)

Query: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60
           MA+ VNTN+S++ AQR L ++  +   S++RLSSG ++NSAKDDAAG  I+  L    RG
Sbjct: 1   MALIVNTNISSLNAQRNLATSNQSLSVSLQRLSSGLRVNSAKDDAAGSAIAEGLTSAIRG 60

Query: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120
              ++RNANDGIS+ QTAEGA+ +  N LQR+R++S+Q++NGS S  +R  +Q+E+  L 
Sbjct: 61  GNQSIRNANDGISVGQTAEGALGQIANNLQRIREISVQASNGSISDTNRSQLQKEVDQLT 120

Query: 121 DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAAN 180
            E++R+ +TT F G KLL+G  +T +FQ+G               +DN +    +  A N
Sbjct: 121 QEISRIVQTTEFNGTKLLSGA-STITFQVGFSGS-----------ADNQVSVDTSNLAQN 168

Query: 181 GKDKNWGVEAGKTDLTITLKDKREGDVTISINAKEGD 217
           G        +G    T T+     G  + +IN  + D
Sbjct: 169 GA-AGLNAYSGTLTATGTVNVTTSGGASAAINKLDAD 204



 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 35/246 (14%)

Query: 162 KDMRSDNALMGGKTYQAANG----KDKNWGVEAGKT------DLTITLKDKREGDVTISI 211
           KD  + +A+  G T     G    ++ N G+  G+T       +   L+  RE    IS+
Sbjct: 42  KDDAAGSAIAEGLTSAIRGGNQSIRNANDGISVGQTAEGALGQIANNLQRIRE----ISV 97

Query: 212 NAKEGDDIEELATYINGQTDMIKASVDEEGKLQLFTDNNRIDGAAT------FGGALAGE 265
            A  G   +   + +  + D +   +    +   F     + GA+T      F G+   +
Sbjct: 98  QASNGSISDTNRSQLQKEVDQLTQEISRIVQTTEFNGTKLLSGASTITFQVGFSGSADNQ 157

Query: 266 LGIGA---AQD------------VTVDTLDVTTVGGAQESVAIVDAALKYVDSHRAELGA 310
           + +     AQ+                T++VTT GGA  ++  +DA +  + + RA  G+
Sbjct: 158 VSVDTSNLAQNGAAGLNAYSGTLTATGTVNVTTSGGASAAINKLDADIAQIANIRATFGS 217

Query: 311 FQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPN 370
            QNRF   ++NL N  EN++ASKSR+ D DFA ET  LT+ QIL QA +++LAQA   P 
Sbjct: 218 VQNRFEAVVSNLQNYVENLSASKSRLIDADFAAETAQLTRNQILQQAGTAILAQANTVPQ 277

Query: 371 SALALL 376
            AL LL
Sbjct: 278 GALTLL 283