Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., flagellin domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  102 bits (255), Expect = 1e-26
 Identities = 56/143 (39%), Positives = 84/143 (58%)

Query: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60
           M++ +N N+ A+ A R L  +     +S  RLSSG ++ +A DDAAGL I   +      
Sbjct: 1   MSLVINHNMMALNASRNLNESYGRLATSTRRLSSGLRVGTAADDAAGLAIRELMRADIST 60

Query: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120
           +   VRNAND ISM QTA+GA++     L RM++L+ Q+A G+ +   R+ I+ E  A+ 
Sbjct: 61  MRQGVRNANDAISMIQTADGALQIIDEKLIRMKELAEQAATGTYNSDQRLMIESEYQAMA 120

Query: 121 DELNRVAETTSFGGNKLLNGTFA 143
            E+ R+A  T F G  LL+GT +
Sbjct: 121 SEITRIANATDFNGIHLLDGTLS 143



 Score = 87.8 bits (216), Expect = 3e-22
 Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 8/178 (4%)

Query: 206 DVTISINAKEGDDIEELATYINGQTDMIKASVDEEGKLQLF----TDNNRIDGAATFGGA 261
           ++T   NA + + I  L   ++G  D   + + + G+L++      D+N        GGA
Sbjct: 122 EITRIANATDFNGIHLLDGTLSGTHD--GSGLRQTGELKIHFGTGNDSNEDYYYIKIGGA 179

Query: 262 LAGELGIG--AAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNRFNHAI 319
            A +LGIG  +A         ++T   AQ ++  +D A+   D  RA LGA QNR  + I
Sbjct: 180 TASQLGIGNASASGAAAGGYTISTQSAAQNALTALDQAIISKDKIRAALGALQNRLENTI 239

Query: 320 NNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALALLG 377
           +NL    EN+ +S+SRI D D A+E T   + QIL+Q++ ++L+QA   P  A+ L+G
Sbjct: 240 SNLTIQAENLQSSESRISDVDVAEEMTEFVRNQILTQSAVAMLSQANSLPQMAMKLIG 297