Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., flagellin (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  102 bits (253), Expect = 2e-26
 Identities = 56/144 (38%), Positives = 84/144 (58%)

Query: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60
           M++ +N N+ AM A   L+++     +S+ RLSSG ++ +A DDAAGL I   +      
Sbjct: 1   MSLVINHNMMAMNAAGNLSNSYGKLSTSVRRLSSGLRVGTAADDAAGLAIRELMRSDISA 60

Query: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120
           L   VRNAND IS+ QTA+GA+      L RM++L+ Q+A G+ +   R+ I  E  A+ 
Sbjct: 61  LNQGVRNANDAISLIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMA 120

Query: 121 DELNRVAETTSFGGNKLLNGTFAT 144
            E+ R+A  T F G  LLNG  ++
Sbjct: 121 SEITRIANATDFNGLHLLNGNLSS 144



 Score = 77.8 bits (190), Expect = 4e-19
 Identities = 42/119 (35%), Positives = 67/119 (56%)

Query: 259 GGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNRFNHA 318
           G + A  LG+G           ++T   AQ+++  +  A+   D+ RA LGA QNR  + 
Sbjct: 178 GTSTASALGVGNQATAGSAGYTISTQSAAQQALVAIQNAIISKDNIRASLGALQNRLENT 237

Query: 319 INNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALALLG 377
           I+NL    EN+ +++SRI D D + E T   + QIL+Q++ ++L+QA   P  A+ LLG
Sbjct: 238 ISNLRTQAENLQSAESRISDVDVSSEMTEFVRQQILTQSAVAMLSQANSLPRMAMQLLG 296