Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., flagellin, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  102 bits (254), Expect = 1e-26
 Identities = 56/143 (39%), Positives = 82/143 (57%)

Query: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60
           M++ +N N+ A  A R L  +     +S+ RLSSG ++ +A DDAAGL +   +      
Sbjct: 1   MSLVINHNLMAQNASRNLGDSYTKLSTSVRRLSSGLRVGNAADDAAGLAVRELMRADIAA 60

Query: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120
           L   VRNAND ISM QTA+GA+      L RM++L+ Q+A G+ +   R+ I  E  A+ 
Sbjct: 61  LSQGVRNANDAISMIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMA 120

Query: 121 DELNRVAETTSFGGNKLLNGTFA 143
            E+ R+A+ T F G  LLNG  +
Sbjct: 121 SEITRIAKMTDFNGVYLLNGNLS 143



 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 45/117 (38%), Positives = 65/117 (55%)

Query: 261 ALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNRFNHAIN 320
           A +  LG+G     T     ++T   AQ ++  +  A+   D  RA LGA QNR  + I+
Sbjct: 180 ATSSALGVGTEAGSTAKAYSISTQSAAQAALEGLTNAIVSKDKIRASLGALQNRLENTIS 239

Query: 321 NLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALALLG 377
           NL    EN+ A++SRI D D + E T   + QILSQ++ ++L+QA   P  AL LLG
Sbjct: 240 NLQIQAENLQAAESRISDVDVSMEMTEFVRQQILSQSAVAMLSQANSLPRLALNLLG 296