Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., flagellin (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  108 bits (271), Expect = 1e-28
 Identities = 62/157 (39%), Positives = 90/157 (57%), Gaps = 6/157 (3%)

Query: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60
           M++ +N N+ AM A R LT +     +S  RLSSG ++N+A DDAAGL I   +      
Sbjct: 1   MSLVINHNMMAMNAARNLTDSYGRLATSTRRLSSGLRVNTAADDAAGLAIRELMRADIST 60

Query: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120
           L   +RNAND ISM QTA+GA++     L RM++L+ Q+A G+ +   R+ I+ E  A+ 
Sbjct: 61  LRQGIRNANDAISMIQTADGALQIIDEKLIRMKELAEQAATGTYNSDQRLMIESEYQAMA 120

Query: 121 DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAV 157
            E+ R+A  T F G  LLNG+ +      G  NG  +
Sbjct: 121 SEITRIANATDFNGIHLLNGSLS------GVHNGSVL 151



 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 48/121 (39%), Positives = 71/121 (58%), Gaps = 2/121 (1%)

Query: 259 GGALAGELGIGAAQDVTVDT--LDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNRFN 316
           GGA A  LG+G A  +  +     ++T   AQ ++A +D A+   D  RA LGA QNR  
Sbjct: 177 GGATASMLGLGNASALGTEAGGYTISTQSAAQAALAAIDQAIISKDKIRASLGALQNRLE 236

Query: 317 HAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALALL 376
           + I+NL    EN+ +S+SRI D D A E T   + QIL+Q++ ++L+QA   P  A+ L+
Sbjct: 237 NTISNLSIQAENLQSSESRISDVDVATEMTEFVRNQILTQSAVAMLSQANSLPQMAMKLI 296

Query: 377 G 377
           G
Sbjct: 297 G 297