Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., flagellin FljJ from Caulobacter crescentus NA1000

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 1/165 (0%)

Query: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60
           MA++VNTN  A+ A + L    +  Q+   R+++G  I++AKD+AA   I+         
Sbjct: 1   MALSVNTNQPALIALQNLNRTNDDMQAVQTRINTGEAISTAKDNAAVWSIAQAQRADMSA 60

Query: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120
           LG    + +   S+A  A  A +  +++L+ MR+  + + + S +   R A+  +   L 
Sbjct: 61  LGAVKMSLDRATSIADVALAAGESVSDLLKLMREKVVAAKDTSLTTTSRQALNADFQGLI 120

Query: 121 DELNRVAETTSFGGNKLLNGT-FATKSFQIGADNGEAVMLNIKDM 164
             LN+V  + +F G  LL+G+  A  SF   AD G+A+ L ++++
Sbjct: 121 KNLNQVLRSATFDGANLLDGSQAADMSFLADADAGQAITLTLQNL 165



 Score = 37.0 bits (84), Expect = 7e-07
 Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 21/143 (14%)

Query: 253 DGAATFGGALAGELGI----GAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDSHRA-- 306
           DGA    G+ A ++       A Q +T+ TL   ++GG   ++   D  L  V++     
Sbjct: 133 DGANLLDGSQAADMSFLADADAGQAITL-TLQNLSLGGTINTLTATDDILDPVNAAGVLT 191

Query: 307 ELGAFQNRFNHAINNLDN--------------INENVNASKSRIKDTDFAKETTALTKAQ 352
            L A  +  N A+ N+                +N+ +      + D D AKE+  L   Q
Sbjct: 192 RLDATLSAVNQAVGNIGTQAKQIDAHNTFVAKLNDVLETGVGNLVDADLAKESARLQALQ 251

Query: 353 ILSQASSSVLAQAKQAPNSALAL 375
           +  Q  +  L+ A  AP   L+L
Sbjct: 252 VKQQLGAQALSIANGAPQIILSL 274