Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., flagellin domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  181 bits (460), Expect = 2e-50
 Identities = 92/161 (57%), Positives = 124/161 (77%)

Query: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60
           MA+ VNTNV+++ AQ+ L ++ +   +SMERLSSG +INSAKDDAAGL ISNRLN Q RG
Sbjct: 1   MAITVNTNVTSLKAQKNLNTSASGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60

Query: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120
           L V +RNAND IS+AQ +EGAM+E TN+LQRMRDL++QS NG+NS  D  AIQ+EI  L 
Sbjct: 61  LEVGMRNANDAISIAQISEGAMQEQTNMLQRMRDLTVQSENGANSTDDLDAIQKEIDQLA 120

Query: 121 DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNI 161
            E+  + + T+FG  KLL+GTF+ K+FQ+G  +GE + +++
Sbjct: 121 LEITEIGDNTAFGSTKLLDGTFSGKTFQVGHQSGEDITISV 161



 Score =  105 bits (262), Expect = 1e-27
 Identities = 75/201 (37%), Positives = 107/201 (53%), Gaps = 22/201 (10%)

Query: 189 EAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEEGKLQLFTD 248
           E    + T  L+  R+  V     A   DD++     I  + D +   + E G    F  
Sbjct: 79  EGAMQEQTNMLQRMRDLTVQSENGANSTDDLDA----IQKEIDQLALEITEIGDNTAFGS 134

Query: 249 NNRIDGAATFGGALAGELGIGAAQDVT------------VDTLDVTTVGGAQES-VAIVD 295
              +DG  TF G    ++G  + +D+T            VD+LD+T  G A+ S +A +D
Sbjct: 135 TKLLDG--TFSGKTF-QVGHQSGEDITISVAKTTASALKVDSLDIT--GSARASALAAID 189

Query: 296 AALKYVDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILS 355
           AA+K +DS RA+LGA QNR  + I+N  N   N+  +KSRI D DFAKET+ +TK Q+L 
Sbjct: 190 AAIKTIDSQRADLGAKQNRLAYNISNSANTQANIADAKSRIVDVDFAKETSQMTKNQVLQ 249

Query: 356 QASSSVLAQAKQAPNSALALL 376
           Q  S++LAQA Q P  AL+LL
Sbjct: 250 QTGSAMLAQANQLPQVALSLL 270