Pairwise Alignments

Query, 295 a.a., 4-diphosphocytidyl-2C-methyl-D-erythritol kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (RefSeq) from Shewanella loihica PV-4

 Score =  314 bits (804), Expect = 2e-90
 Identities = 156/279 (55%), Positives = 205/279 (73%), Gaps = 1/279 (0%)

Query: 10  TTVWPSPAKLNLFLYITGRRANGYHDLQTLFQFLDHGDELTITANNSGNITLSPAL-ADV 68
           +T WP+PAKLNLFL++ GRRA+GYH+LQTLFQF+D+ D L    N+SG++TL   + A V
Sbjct: 6   STAWPAPAKLNLFLHVNGRRADGYHELQTLFQFIDYCDYLDFAVNDSGSLTLHSEMEAVV 65

Query: 69  ALEDNLIYKAAMALKNAAQSPLGADIQLHKVLPMGGGIGGGSSNAATTLVALNYLWQTGL 128
           A  DNLI KAA +L+    +  GA+I L K LPMGGGIGGGSS+AATTLVALN+LWQT L
Sbjct: 66  ANSDNLILKAAKSLQEYTGTHQGAEIWLDKKLPMGGGIGGGSSDAATTLVALNHLWQTQL 125

Query: 129 SDDQLAEIGLALGADVPVFTRGFAAFAEGVGEELSAVEPEEKWYLVVRPAVSIATKDIFT 188
           S D+LA+IGL+LGADVPVF  G AAFAEGVGE+L  VE  E WYL++ P V ++T ++F 
Sbjct: 126 SQDELAKIGLSLGADVPVFINGLAAFAEGVGEKLIPVEAPENWYLILTPDVHVSTAEVFN 185

Query: 189 HPQLMRNTPKRDLASLLTTPYENDCEKIVRSLYPEVDKQLSWLLQYAPSRLTGTGSCVFA 248
            P L R+TPK  +  L+++ + NDC+  V   YP+V K L+WL++YAPSR+TGTG+CVF 
Sbjct: 186 DPLLPRDTPKLSMDDLMSSDWHNDCQPRVAERYPQVAKALAWLIEYAPSRMTGTGACVFG 245

Query: 249 EFSSRKDAQAVFAQLSDNVLAFVAQGRNVSPLRKTLADY 287
            F +R+ A+ VFA+L   +  F+A+G N SPL   L  +
Sbjct: 246 IFDTRQQAEHVFAKLPAGLCGFIAKGTNKSPLALRLTQH 284