Pairwise Alignments

Query, 295 a.a., 4-diphosphocytidyl-2C-methyl-D-erythritol kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  105 bits (262), Expect = 1e-27
 Identities = 84/252 (33%), Positives = 127/252 (50%), Gaps = 24/252 (9%)

Query: 17  AKLNLFLYITGRRANGYHDLQTLFQFLDHGDELTITANNSGNITLSPALADVAL----ED 72
           AK+NL L IT +R +GYH+L+T+F  +   D L I  +   +   S     + +    ED
Sbjct: 7   AKINLGLSITEKRPDGYHNLETVFYPVALEDALEIRTSPEADKKFSLHQYGMEISGNPED 66

Query: 73  NLIYKAAMAL-KNAAQSPLGADIQLHKVLPMGGGIGGGSSNAATTLVALNYLWQTGLSDD 131
           NL+ KA + L K     P+  +I L+K +P G G+GGGSS+AA  L  LN  +Q  LS+D
Sbjct: 67  NLVVKAYLLLDKEFHLCPI--EIHLYKHIPSGAGLGGGSSDAAFMLKLLNEHFQLNLSED 124

Query: 132 QLAEIGLALGADVPVFTRGFAAFAEGVGEELSAVEPEEKWY--LVVRPAVSIATKDIFT- 188
           QL      LGAD   F R    FAEGVG   S +    K Y  L+++P V ++T++ F  
Sbjct: 125 QLEIYAATLGADCAFFIRNAPTFAEGVGNIFSPIPLSLKGYQILIIKPDVFVSTREAFAN 184

Query: 189 -HPQLMRNTPKRDLASLLTTPYE-------NDCEKIVRSLYPEVDKQLSWLLQYAP--SR 238
            HP    + P+  +   +  P         ND E  V   +P + +  + L +     + 
Sbjct: 185 IHP----HHPEYSIKEAIKRPVNEWKEILINDFEDSVFPQHPVIGEIKAELYRQGAVYAS 240

Query: 239 LTGTGSCVFAEF 250
           ++G+GS V+  F
Sbjct: 241 MSGSGSSVYGLF 252