Pairwise Alignments

Query, 205 a.a., outer membrane lipoprotein LolB from Vibrio cholerae E7946 ATCC 55056

Subject, 214 a.a., outer membrane lipoprotein LolB (RefSeq) from Shewanella sp. ANA-3

 Score = 79.3 bits (194), Expect = 5e-20
 Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 18/199 (9%)

Query: 12  LASLLLLAGCATAP----LQPVNVQWQSHQVTLEQIQHYQLTGKLGYIAPDQRQSFNFQW 67
           L+ LL L GC T P    L P+ V          Q + ++L GKL    P  + S N  W
Sbjct: 17  LSGLLFLGGCETLPPTTDLSPMTVD------NAAQAKAWELQGKLAIRTPQDKLSANLYW 70

Query: 68  QKSPQKLSLRLSNFLGQTVLNLQVDEQGARVETYDDQIYRDQDAQSLIRNLTGLDIPVEQ 127
           + S ++  L L+  LG TVL L      A +   D + +RD +AQ+L+  ++G  IP+  
Sbjct: 71  RHSEERDELTLTTMLGTTVLTLDATPNSAHLHV-DGKDFRDSNAQALLERVSGWSIPIND 129

Query: 128 LEDWILGLPTQATHYELNEQNTLATLTKLAST-EEWHVEYQRYQAIEWQHQP-IPLPDKL 185
           L  WI G           + N      + + T   W V +     + WQ Q    +P +L
Sbjct: 130 LPLWITGQVGALDRVLAVDSNGKTKQIQNSQTLPPWVVTF-----LSWQPQSGAEVPYQL 184

Query: 186 KLQQNKTSIQLVISQWTLL 204
           KL++    ++L ++QW  L
Sbjct: 185 KLERGDLQLKLQLNQWQAL 203