Pairwise Alignments

Query, 362 a.a., peptide chain release factor 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., Peptide chain release factor 2; programmed frameshift-containing from Pseudomonas fluorescens FW300-N2E2

 Score =  196 bits (498), Expect = 9e-55
 Identities = 123/332 (37%), Positives = 182/332 (54%), Gaps = 8/332 (2%)

Query: 14  ERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEMAQEDD 73
           ER  EV   L DP V  + +  + L +E S L +I +          D     +MA E++
Sbjct: 62  ERLTEVNRELEDPNVWNNPSYAQELGRERSALAQIVETLDELSSGLADCRDLLDMAVEEN 121

Query: 74  AEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDL 133
            E    A  ++ A    ++    +L+   +     D  N +L+I+AG+GG EA  +A  L
Sbjct: 122 DEG---AVGDVVAELTRLDENLAKLEFRRMFSGEMDMNNAYLDIQAGSGGTEAQDWANIL 178

Query: 134 FRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATE 193
            RMY R+A+K+G+   +M  S  E  G K     + G+ A+G L+ E G HR+ R    +
Sbjct: 179 LRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFD 238

Query: 194 AQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPT 253
           +  R HTS   V V PEI +    EI  +DL+IDT+RSSGAGGQHVNTTDSA+RITH+PT
Sbjct: 239 SGNRRHTSFSAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPT 298

Query: 254 GIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRT 311
             VV CQ+ERSQH NK  AM +L AR+ + E  KR  A++  +  ++ +G G    +IR+
Sbjct: 299 NTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWG---HQIRS 355

Query: 312 YNYPQGRVSDHRINLTVYRLTEVMEGDMQSLI 343
           Y     R+ D R ++      +V++GD+   +
Sbjct: 356 YVLDASRIKDLRTSIERSDCDKVLDGDIDEYL 387