Pairwise Alignments

Query, 362 a.a., peptide chain release factor 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., peptide chain release factor 2, programmed frameshift (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  199 bits (506), Expect = 1e-55
 Identities = 124/342 (36%), Positives = 189/342 (55%), Gaps = 14/342 (4%)

Query: 15  RYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEMAQEDD- 73
           R  E++  L  P    +  K   + +E S LE      +A +  + D+     +A+ED+ 
Sbjct: 33  RLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEGEINRLEALETCRNDVSEWLLLAEEDES 92

Query: 74  AEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDL 133
           AE  E  +++I      +E+L +E ++ LL     D     LEI  GAGG EA  +A  L
Sbjct: 93  AEALESLEEQI----IRLEQLIEETEMNLLLSGKEDRFAALLEIHPGAGGTEAQDWAEML 148

Query: 134 FRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATE 193
            RMY R+A+  G++ E +   + +  G K +  ++ G  AYG LK E G HR+ R+   +
Sbjct: 149 LRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLKGERGIHRLIRISPFD 208

Query: 194 AQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPT 253
           A GR HTS  +V V+P++ +    EIK +DL+ID FRSSG GGQ VNTT SA+R+TH+PT
Sbjct: 209 ASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQSVNTTSSAVRVTHIPT 268

Query: 254 GIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDR---SDRIR 310
           GIV +CQ+E+SQH NK  A+ +L  R+ + E  K    + + ++   G+ D      +IR
Sbjct: 269 GIVAQCQNEKSQHHNKDSALQILRGRLYELELRK----LEEEKKAQYGAKDAIGFGSQIR 324

Query: 311 TYN-YPQGRVSDHRINLTVYRLTEVMEGDMQSLI-DPVIHEH 350
           TY   P   V DHR N  V  +  V++G +  L+ D +++ H
Sbjct: 325 TYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLRDYLLYLH 366