Pairwise Alignments

Query, 362 a.a., peptide chain release factor 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., peptide chain release factor 1 (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  346 bits (887), Expect = e-100
 Identities = 182/349 (52%), Positives = 241/349 (69%), Gaps = 7/349 (2%)

Query: 8   KLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEE 67
           KL  + ER+E ++  +       D     AL +EY++L+ +     AY +A+ DL  AE 
Sbjct: 6   KLAQITERFEYIEARMAAGAAGED---IAALGREYAELKPVVAEIAAYSRARADLAEAEA 62

Query: 68  MAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127
           M   DD EMR +A++EI A KA I  +   L++ LLPKD  D R   +EIR G GG+EA 
Sbjct: 63  ML--DDPEMRALAEEEIPALKARIPEMEQALRLALLPKDAADARPAMIEIRPGTGGEEAA 120

Query: 128 IFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQ 187
           +FAGDL RMY R+AE +GWR +++S S  E GG KE+IA V+G G +  LK+ESG HRVQ
Sbjct: 121 LFAGDLLRMYQRYAEAQGWRFQIVSESLTELGGIKEVIAHVSGSGVFAKLKYESGVHRVQ 180

Query: 188 RVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIR 247
           RVP TE+ GRIHTSA TVAV+PE    +I +I ASD++IDT R+SGAGGQHVNTTDSA+R
Sbjct: 181 RVPVTESGGRIHTSAATVAVLPEAEAVDI-DIPASDIRIDTMRASGAGGQHVNTTDSAVR 239

Query: 248 ITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSD 307
           ITH+PTG+VV    E+SQH+N+  AM VL AR+   E  +  AE S  R+  +GSGDRS+
Sbjct: 240 ITHIPTGLVV-TSSEKSQHRNRDIAMQVLRARLYDLERQRADAERSAARKGQVGSGDRSE 298

Query: 308 RIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVIHEHQADQLA 356
           RIRTYN+PQGR++DHRINLT+Y+L +VM+GD+  +I  +  + QA  LA
Sbjct: 299 RIRTYNFPQGRMTDHRINLTLYKLDQVMQGDLDEVIAALAADDQARLLA 347