Pairwise Alignments

Query, 362 a.a., peptide chain release factor 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., bacterial peptide chain Release factor 1 (RF-1) from Caulobacter crescentus NA1000

 Score =  364 bits (934), Expect = e-105
 Identities = 186/355 (52%), Positives = 257/355 (72%), Gaps = 8/355 (2%)

Query: 7   SKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAE 66
           ++L+ +++R+ EV+  +G  T   D  +   LSKE+++L  + +  +   +   +    +
Sbjct: 6   ARLDQVLDRFREVEARMGAAT---DGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELD 62

Query: 67  EMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEA 126
            MA   D EM EM +DEI+A    +  +  EL ++L PKD +++ +  LE+RAG GGDEA
Sbjct: 63  VMAS--DPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDEA 120

Query: 127 GIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRV 186
            +FAGDLFRMY R+A+ +GWR+E+ S SE E GG+KE++A + GDG +G LKFESG HRV
Sbjct: 121 ALFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHRV 180

Query: 187 QRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAI 246
           QRVPATEAQGRIHTSA TVAV+PE  + EI EIK SDL+IDT+RSSGAGGQHVN TDSA+
Sbjct: 181 QRVPATEAQGRIHTSAATVAVLPEAEDVEI-EIKESDLRIDTYRSSGAGGQHVNKTDSAV 239

Query: 247 RITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRS 306
           RITHLPTG+VV    E+SQH+N+A+AM  L AR+   +     +  S+ R++ +GSGDRS
Sbjct: 240 RITHLPTGVVV-TSSEKSQHQNRARAMKNLKARLYDMQREALDSARSEARKSQVGSGDRS 298

Query: 307 DRIRTYNYPQGRVSDHRINLTVYRLTEVMEGD-MQSLIDPVIHEHQADQLAALAD 360
           +RIRTYN+PQGRV+DHRINLT+Y L  +MEGD +  +I+P+I E QA++LA+L +
Sbjct: 299 ERIRTYNFPQGRVTDHRINLTLYNLARIMEGDALDDVINPLIAEDQAERLASLEE 353