Pairwise Alignments

Query, 362 a.a., peptide chain release factor 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., peptide chain release factor 1 (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  345 bits (885), Expect = 1e-99
 Identities = 172/362 (47%), Positives = 249/362 (68%), Gaps = 10/362 (2%)

Query: 3   ASILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDL 62
           ++IL KL+ LV R+EE+  L+ DP VI DQ ++  L+KEY  L+++ +  + Y Q   ++
Sbjct: 5   STILEKLDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKDLDDLMKARKEYIQLLGNI 64

Query: 63  VAAEE-MAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGA 121
             A+  ++ E DA+MREMA++E+  ++  +  L +E++++L+P DP D +N  LEIR GA
Sbjct: 65  EEAKNILSNESDADMREMAKEEMDNSQERLPALEEEIKLMLVPADPQDSKNAILEIRGGA 124

Query: 122 GGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFES 181
           GGDEA IFAGDLFRMY++F E KGW++EV +++E   GGYKE++  V GD  YG LK+ES
Sbjct: 125 GGDEAAIFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGYKEIVCSVTGDNVYGILKYES 184

Query: 182 GGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNT 241
           G HRVQRVPATE QGR+HTSA +VAV+PE  E ++  I   ++K DTFRS GAGGQ+VN 
Sbjct: 185 GVHRVQRVPATETQGRVHTSAASVAVLPEAEEFDV-VINEGEIKWDTFRSGGAGGQNVNK 243

Query: 242 TDSAIRITHL----PTG----IVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEIS 293
            +S +R+ ++     TG    I++EC + R Q KNK +A++ L   I   E  K   +I+
Sbjct: 244 VESGVRLRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIA 303

Query: 294 DTRRNLLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVIHEHQAD 353
             R+ ++ +GDRS +IRTYNYPQGR++DHRIN T+Y L   M+GD+Q  ID +I    A+
Sbjct: 304 SKRKTMVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAENAE 363

Query: 354 QL 355
           +L
Sbjct: 364 RL 365