Pairwise Alignments

Query, 127 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 128 a.a., invasion gene expression up-regulator, SirB (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (287), Expect = 3e-31
 Identities = 62/125 (49%), Positives = 79/125 (63%), Gaps = 2/125 (1%)

Query: 1   MYEGLKHFHLFTIGVSVVMLSIRYVLMMMNSAHLERKFFKIFPHVNDTLLLLSGIGLIFI 60
           +Y  +KH HL  I VSV+   +R+VL +  SA +++KF KI PHV DT LLLSG+ L FI
Sbjct: 4   LYPAIKHIHLTLIAVSVLFFIVRFVLHLKQSAIMDKKFVKIAPHVIDTFLLLSGLTLCFI 63

Query: 61  TGFIPFTAAAPWMTEKFTCVLAYIALGFFALKLGRNKLLRSFAFFGALGWLAMAGKIAVA 120
               PF  A  W+TEK   V+AYI L   +LK  RNKL ++FA  GAL W+  A KIA+ 
Sbjct: 64  IKQYPFQDA--WLTEKIGAVIAYIFLAAISLKANRNKLFKTFAALGALAWVMYAAKIAMF 121

Query: 121 KAPIL 125
           K  IL
Sbjct: 122 KQAIL 126