Pairwise Alignments

Query, 270 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  118 bits (295), Expect = 1e-31
 Identities = 77/260 (29%), Positives = 131/260 (50%), Gaps = 9/260 (3%)

Query: 10  DAMELVEGALALNKAINPET--QLEWAHIELARLLKEAELALVHERDEKARFEAFLRLFY 67
           D + L E AL +   +        +WA  ELA  +    L      D++ R  A  R FY
Sbjct: 8   DGISLPESALDVGAHLGFSNLEAAKWAWFELAGAVLSHYLV-----DQQQRLTALFRWFY 62

Query: 68  QEWGFSGDREAYFDSRNAFIDQVLQRRKGIPVSLGSLLLYLGHKLGFPLNGISFPTQFLL 127
            + GF   RE YF +  A +   L  ++G   +L ++L+ L  +L   L  +  P   +L
Sbjct: 63  LDLGFCV-RENYFSTEAADLGTCLITKQGNSTTLATVLMLLAKQLDLELEALLLPGNTVL 121

Query: 128 SLNWSGERPIYLNPFNGEIVSQHTLQAWLVGHKGPLAKLKPQHLQSVDNPTIIGRWLALL 187
               +G    Y +P  G+ +++H L   + G  G  A+LKP +L++     +I R L  +
Sbjct: 122 RSKIAGVVR-YHDPLTGKELTKHQLHVLVRGELGNAAELKPSYLKAASVKKLISRMLHEI 180

Query: 188 KSALLREERYTLALRCTDLALTFVPDDPYEIRDRGFIYQQLQCHQIAISDYQYFIEHCPN 247
           K+  +   ++  A+ C +L L + PDD +  R+R FI QQL C  +A +D Q+F+++ P+
Sbjct: 181 KAGCIVSHQFEAAMECCNLLLQWHPDDVHLNRERAFIAQQLGCINVAAADLQHFVDNSPH 240

Query: 248 DPAAELLKTQVNALSHDSQV 267
           DP  E++K Q+  LS  +++
Sbjct: 241 DPVIEIVKMQLKELSEHAEI 260