Pairwise Alignments

Query, 283 a.a., 3-deoxy-8-phosphooctulonate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., 2-dehydro-3-deoxyphosphooctonate aldolase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  233 bits (593), Expect = 5e-66
 Identities = 115/273 (42%), Positives = 170/273 (62%), Gaps = 2/273 (0%)

Query: 4   KIVHVGDIPVANDKPFTLFAGMNVLESRDLAMQICEHYVKVTDKLGIPYVFKASFDKANR 63
           K + +G++ V ND+P TL AG   LES +  ++I     +  D+ G  ++FKAS+DKANR
Sbjct: 2   KTLQIGELRVGNDQPLTLIAGPCQLESFEQGLEIGAALKEACDRSGAQFIFKASYDKANR 61

Query: 64  SSVHSYRGPGLEEGMKIFQELKETFGVKIITDVHTEAQAQPVADVVDVIQLPAFLARQTD 123
           +S    RG G+  G+     L+ET GV ++TDVH      P A+ VD++Q+PAFL RQTD
Sbjct: 62  TSAGGVRGMGMAAGLDALGRLRETLGVPVLTDVHAAEHCAPAAEAVDILQIPAFLCRQTD 121

Query: 124 LVEAMAKTGAVINVKKPQFMSPGQVGNIVEKFAECGNDKVILCERGSCHGYDNLVVDMLG 183
           L+ A  +TGAV+NVKK QF++P  + +++ K    GN +++L ERG+  GY+ LV DM  
Sbjct: 122 LLIAAGETGAVVNVKKGQFLAPWDMPHVIGKIESTGNTRIMLTERGASFGYNTLVADMRS 181

Query: 184 FGVMKQASNGSPIIFDVTHSLQMRDPSGAASGGRREQTVELAKAGLATGIAGLFIEAHPN 243
              M +   G P++ D THS+Q     G ASGG+RE    +A+A ++ GIA +FIE HP 
Sbjct: 182 LPTMMK--TGYPVVMDATHSVQQPGGLGGASGGQREFAPVMARAAVSLGIAAVFIETHPA 239

Query: 244 PDKARCDGPSALPLDKLEPFLAQMKALDDLIKS 276
           PD A  DGP+ +PL +++  +  + A D L K+
Sbjct: 240 PDTAPSDGPNMIPLAQMQDLIGDLMAFDALAKT 272