Pairwise Alignments

Query, 553 a.a., bifunctional UDP-sugar hydrolase/5'-nucleotidase from Vibrio cholerae E7946 ATCC 55056

Subject, 571 a.a., bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor (RefSeq) from Shewanella amazonensis SB2B

 Score =  615 bits (1586), Expect = e-180
 Identities = 319/561 (56%), Positives = 398/561 (70%), Gaps = 22/561 (3%)

Query: 6   ILKSVLSAAIIASLAGCATAP----------AQQWEADKTYKLTILHTNDHHGRFWQNQY 55
           ++K +L+ A++A+L GC  A           A+  +A KT+  T+LHTND+HGRFW+N+ 
Sbjct: 5   LMKGLLATAVLAALTGCMDADPKEPVVPTTCAEAGDACKTF--TVLHTNDNHGRFWENKD 62

Query: 56  GEYGMAARKTLIDQLRADIEAQGGSVLLLSGGDINTGVPESDLQDAEPDFKGMSKIGYDA 115
           GEYGMAARK LIDQ+R ++E  GG VLLLSGGDINTGVPESDLQDA PDF GM+KIGYDA
Sbjct: 63  GEYGMAARKALIDQIRGEVEGNGGEVLLLSGGDINTGVPESDLQDAVPDFIGMTKIGYDA 122

Query: 116 MALGNHEFDNPLEVLFKQKEWANFPMLSANIYDKATGKRLFEPYHIFDKQGIKIAVIGLT 175
           MA+GNHEFDNPL +L  Q++ A+FP LSANIY KA G R F+ Y +FD  G++IAV+GLT
Sbjct: 123 MAVGNHEFDNPLNILDMQRQLADFPFLSANIY-KADGTRYFDAYKVFDVNGVRIAVVGLT 181

Query: 176 TEDTAKIGNPEYIGGIDFRDPKEEAKKVIAELKKKEKPDLIIAVTHMGHYQNGEHGVNAP 235
           TEDTAKIGNPE+I  + F DPKEE  KVI E+K  +K D+I AVTHMGHY + ++G NAP
Sbjct: 182 TEDTAKIGNPEFISELTFTDPKEEVAKVIKEIKDGDKADMIFAVTHMGHYADAQNGSNAP 241

Query: 236 GDVALARYLPAGELDMIVGGHSQEPVCMEGPNLVKKNFKPGDECKPDIQNGTYIVQAYEW 295
           GDVA+AR L  G+L +++GGHSQ PVCME       +FK GDEC PD QNGT+I+QA+EW
Sbjct: 242 GDVAMARSLNKGDLQLVIGGHSQNPVCMEPGTNNYADFKAGDECTPDQQNGTWIMQAHEW 301

Query: 296 GKYVGRADYEFRNGELNMVSYNLIPVNLKKKVE-VNGETQRVFATSEIKEDSAMLEFLRP 354
           GKYVGRAD+E+ NGEL++  Y LIPVNLKK VE  +G   +V     I  D+ + E L+ 
Sbjct: 302 GKYVGRADFEYFNGELHLAGYKLIPVNLKKTVEDESGNKSKVLVGDAITPDAELKELLQY 361

Query: 355 FQEKGQEQLSIKIAHSNGKLEGDRNVVRFEQTNLGRMIAMAHMQRAKADFAVMNSGGVRD 414
           +Q+KGQ  L   IA ++ KLEGDR +VR +QTNLGR++AMA   +  AD  VMNSGGVR 
Sbjct: 362 YQDKGQASLDEVIATTDDKLEGDRTMVRGQQTNLGRLLAMAQSVKVNADVGVMNSGGVRA 421

Query: 415 SIQAGDITYKDVLKVQPFGNIVSYVDMNGQEVLDYLNVVATKPVDSGAYAQFAGISMTVA 474
           SI AGDI+Y+DVL VQPFGN+V+   M G E+ +YL  VA+    SGAYAQ  G+ MTV 
Sbjct: 422 SIAAGDISYRDVLTVQPFGNMVTLSTMTGAELTEYLGAVASMQRGSGAYAQITGVKMTV- 480

Query: 475 DGKVSNVVI---GGKQLRLDATYRFTVPSFNAAGGDGYPKITDHPGYVNTGFVDAEVLKD 531
           D     V I    GK     A+Y FTVPSFNAAGGDGYP +      V TG+VDA+VL D
Sbjct: 481 DCTAKTVAISDVNGKGYDAGASYTFTVPSFNAAGGDGYPVLAP----VQTGYVDADVLYD 536

Query: 532 YLEANSPIDVNRFAPAGEIVY 552
           + +    I    + P G+IVY
Sbjct: 537 FFKQKGSIKAADYNPMGDIVY 557