Pairwise Alignments

Query, 553 a.a., bifunctional UDP-sugar hydrolase/5'-nucleotidase from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., 5'-nucleotidase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 117/566 (20%), Positives = 208/566 (36%), Gaps = 130/566 (22%)

Query: 36  YKLTILHTNDHHGRFWQNQYG---------------EYGMAARKTLIDQLRADIEAQGGS 80
           Y L++ H ND H  F  ++                   G A     I + R   +     
Sbjct: 5   YSLSLAHINDTHSNFEPSRVHFSLNLGLKSFDITSHSGGYARLGYHISKAREQADQSNTP 64

Query: 81  VLLLSGGDINTGVPESDLQDAEPDFKGMSKIGYDAMALGNHEFDNPLEVLFKQKEWANFP 140
            L L GGD   G         + +   ++ +  DAM +GNH+ D     L +  +  +FP
Sbjct: 65  FLFLHGGDSFQGTLYFSHFKGKANAHLLNLLAPDAMVIGNHDIDEGNARLAEFAKQIDFP 124

Query: 141 MLSANI---------------------YDKATGKRLFEPYHIFDKQGIKIAVIGLTTEDT 179
           +L+ N+                     YD+ T    +     +DK   K+AVIG+T +  
Sbjct: 125 LLAGNMDLSQEDIRKPGNLRTVANILAYDEKTQLASYLEKPFYDK---KLAVIGITLDQM 181

Query: 180 AKIGNPEYIGGIDFRDPKEEAKKVIAELKKKEKPDLIIAVTHMGHYQNGEHGVNAPGDVA 239
             I  P+      F D      + +  L  K    +I+ ++H+G  Q+        G   
Sbjct: 182 KDIARPD--PDTHFVDAIATTARTVEHLHAKGIKHIIV-LSHLGLDQDKRLAEQVDG--- 235

Query: 240 LARYLPAGELDMIVGGHSQEPVCMEGP-NLVKKNFKPGDECKPDIQNGTYIVQAYEWGKY 298
                    + +IVGGH+     ++G    +  +  P  E    + NGT IV A ++ + 
Sbjct: 236 ---------ISLIVGGHTH---TLQGDFTALGLSHLPYGE----MVNGTPIVHAGKYAET 279

Query: 299 VGRADYEF----RNGELNMVSYNLIPVNLKKKVEVNGETQRVFATSEIKEDSAMLEFLRP 354
           +G A+ EF    R   L+  +Y ++            + Q + ++SE  +D+      + 
Sbjct: 280 LGLAEVEFDAAGRTIRLSGGNYFML------------DKQFILSSSEQVDDTDYQAVRQR 327

Query: 355 FQ-------EKGQEQLS--IKIAHSNGKLEGDRNVVRFEQTNL----------------- 388
           F        ++  E +   I   +     E +  ++     NL                 
Sbjct: 328 FDAHPFILGDEADEDIHDIIHDIYRPAIAEMENKILALVPKNLVHTRLPSKTLPHGSEIA 387

Query: 389 ----GRMIAMAHMQRAKADFAVMNSGGVRDSIQAGDITYKDVL-KVQPFGNIVSYVDMNG 443
                 M   A ++  +  FA+ N+GGVR S+  G +T  DVL ++ PF   +   ++ G
Sbjct: 388 PWVSRSMFQEARIEDPRIHFALHNAGGVRQSVAQGQLTLADVLGQLLPFELPLVKYEIQG 447

Query: 444 QEVLDYLNVV-------ATKPVDSGAYAQFAGISMTVADG---------KVSNVVIGGKQ 487
           + +   L          + +   +G++    G+     DG         K+  +   G+ 
Sbjct: 448 EYLYQALESAINAATNNSVRGTGAGSFPYTYGLRY-YYDGRRPLGERLFKLEMMPQDGQS 506

Query: 488 L----RLDATYRFTVPSFNAAGGDGY 509
           L    + DA Y     S+ AAG +GY
Sbjct: 507 LWYPVKQDALYVGVSTSYTAAGKEGY 532