Pairwise Alignments

Query, 553 a.a., bifunctional UDP-sugar hydrolase/5'-nucleotidase from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., 5'-nucleotidase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  619 bits (1596), Expect = 0.0
 Identities = 316/558 (56%), Positives = 403/558 (72%), Gaps = 16/558 (2%)

Query: 5   LILKSVLSAAIIASLAGC-------ATAPAQQWEADKTYKLTILHTNDHHGRFWQNQYGE 57
           +++K +++ A++ +LAGC        T  A+   A KT+  TILHTND+HGRFW+N+ GE
Sbjct: 4   MLIKGLIATAVLTALAGCNSDDDKVPTTCAEAGAACKTF--TILHTNDNHGRFWENKDGE 61

Query: 58  YGMAARKTLIDQLRADIEAQGGSVLLLSGGDINTGVPESDLQDAEPDFKGMSKIGYDAMA 117
           YG+AA+KTL+DQ+RA++  +GG  LLLSGGDINTGVPESDLQDA PDF GM+KIGYDAMA
Sbjct: 62  YGLAAQKTLVDQIRAEVSKKGGQTLLLSGGDINTGVPESDLQDAIPDFTGMNKIGYDAMA 121

Query: 118 LGNHEFDNPLEVLFKQKEWANFPMLSANIYDKATGKRLFEPYHIFDKQGIKIAVIGLTTE 177
           +GNHEFDNPL V+  Q+  A FPML+ANIY KA G R F+ Y IFD  G+KIAVIGLTTE
Sbjct: 122 VGNHEFDNPLSVVDMQRSLAEFPMLAANIY-KADGTRYFDAYKIFDVNGVKIAVIGLTTE 180

Query: 178 DTAKIGNPEYIGGIDFRDPKEEAKKVIAELKKKEKPDLIIAVTHMGHYQNGEHGVNAPGD 237
           DTAKIGNPEYI  ++FRDPK+E   VI E+K+ +  D+I AVTHMGHY +G++G NAPGD
Sbjct: 181 DTAKIGNPEYISELEFRDPKKEVANVIKEIKEAKSADIIFAVTHMGHYADGQNGSNAPGD 240

Query: 238 VALARYLPAGELDMIVGGHSQEPVCMEGPNLVKKNFKPGDECKPDIQNGTYIVQAYEWGK 297
           VALAR L  G+L +++GGHSQ PVCME  N     FKPGD C PD QNGT+I+QA+EWGK
Sbjct: 241 VALARSLKEGDLQVVIGGHSQNPVCMEPGNKAYAAFKPGDACAPDQQNGTWIMQAHEWGK 300

Query: 298 YVGRADYEFRNGELNMVSYNLIPVNLKKKV-EVNGETQRVFATSEIKEDSAMLEFLRPFQ 356
           YVGRAD+E+ NGEL++ SY L+PVNL K+V +  G  ++V    +I+ D+ + E L  +Q
Sbjct: 301 YVGRADFEYFNGELHLASYKLVPVNLVKEVTDEAGNKKKVLVGEKIEPDTELKELLSYYQ 360

Query: 357 EKGQEQLSIKIAHSNGKLEGDRNVVRFEQTNLGRMIAMAHMQRAKADFAVMNSGGVRDSI 416
           EKGQ +L   IA ++  L+G+R  VR +QTNLGRM+AMA   +  ADF VMNSGGVR SI
Sbjct: 361 EKGQAKLDEVIATTDALLDGERANVRNKQTNLGRMLAMAQSGKVSADFGVMNSGGVRASI 420

Query: 417 QAGDITYKDVLKVQPFGNIVSYVDMNGQEVLDYLNVVATKPVDSGAYAQFAGISMTV--A 474
           +AG+ITY+DVL VQPFGN+V+  +M G    DYL  V +  + SG YAQ  G+ MTV   
Sbjct: 421 KAGNITYRDVLTVQPFGNMVTLNEMTGAAAADYLGAVGSLQIGSGGYAQITGVKMTVDCV 480

Query: 475 DGKVSNVVIGGKQLRLDATYRFTVPSFNAAGGDGYPKITDHPGYVNTGFVDAEVLKDYLE 534
             K +   I GK     ATY+FTVPSFNAAGGDGYPK+      + TG+VDA++L  +L+
Sbjct: 481 AKKATVHEINGKAFSATATYKFTVPSFNAAGGDGYPKLVSP---IQTGYVDADLLYTFLK 537

Query: 535 ANSPIDVNRFAPAGEIVY 552
               I    + P G+IVY
Sbjct: 538 EKQSIVAADYNPVGDIVY 555