Pairwise Alignments

Query, 417 a.a., uracil permease from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., permease transmembrane protein from Sinorhizobium meliloti 1021

 Score =  139 bits (350), Expect = 2e-37
 Identities = 108/419 (25%), Positives = 197/419 (47%), Gaps = 36/419 (8%)

Query: 3   NAIQGAQMLFVAFGALVLVPLLTG-----------LDPNVALFGAGLGTLLFQL---ITR 48
           N   G Q +   +G +V VPL+ G           L    +LF  GL T+L  +      
Sbjct: 24  NLAYGLQHVLTMYGGIVAVPLILGQAAGLGSGDIGLLITASLFAGGLATILQTMGLPFFG 83

Query: 49  RSVPIFLASSFAFIAPIMFGIQTWGIPATMGGLMAAGAVYIVLGGIIKVRGVAIIHKLLP 108
             +P+    SF+ +A ++      G+ + +G ++AA  + +++  I      + I +  P
Sbjct: 84  SQLPLVQGVSFSGVATMIAISGNGGLQSVLGAVIAASLIGLLITPIF-----SRITRFFP 138

Query: 109 PVVVGPVIMVIGLGLAPAAVNMALGKTGDGSVQLVDPQAALWISCISLLVTVVFSVFAKG 168
           P+V G VI  IGL L P A   A+G  G+ S       A + ++ ++L++ ++ S     
Sbjct: 139 PLVTGIVITTIGLTLMPVAARWAMG--GNSSAPDFGSPANIQLAAVTLVIVLLLSKLGSA 196

Query: 169 FFKLVPILAGIVSGYAVSLVMGVVSFAAVEQAAWLALP---NFTFPEFNINAILFMIPVA 225
               + IL  ++ G  ++   G+  F+ V +  + ALP   +F +P F + AI  M  V 
Sbjct: 197 AISRLSILLALIIGTVIAYFAGMADFSQVTEGPFFALPLVFHFGYPTFEVAAIASMFIVI 256

Query: 226 IAPAVEHVGDMLAISNVTNKDYLKKPGLHRTIAGDGVATMAATMLGAPPNTTYSEVTGAV 285
           +   VE   D+LA+  +     +    L   +  D ++++ A + G+   + +++  G V
Sbjct: 257 MVTLVETSADILAVGEIIETK-VDSRRLGDGLRADMLSSLLAPIFGSFTQSAFAQNVGLV 315

Query: 286 MLTRAFNPAIMTWAAITAIVLALVGKLGALLQTIPVPVMGGIMILLFGSIATVGLNTLIK 345
            +T   +  ++    +  + L L+  +G ++  +P  V+GG  I+LFG++A  G+ TL K
Sbjct: 316 AVTGVKSRYVVATGGLFLVTLGLLPVMGRIVAAVPSSVLGGAGIVLFGTVAASGIRTLSK 375

Query: 346 NQVDLHKSRNLVIVAVTLVFGIGGMA---------FGVGDFSLQGVSLCGIVAIVLNLV 395
             VD   + NLVIVA ++ FG+  +A           V      G+S   ++AI LNL+
Sbjct: 376 --VDYANNMNLVIVATSIGFGMIPIASPTFYEHFPAWVETIFHSGISSAALMAISLNLI 432