Pairwise Alignments

Query, 417 a.a., uracil permease from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., uracil-xanthine permease family protein from Methanococcus maripaludis S2

 Score =  186 bits (472), Expect = 1e-51
 Identities = 129/420 (30%), Positives = 211/420 (50%), Gaps = 33/420 (7%)

Query: 1   MKNAIQGAQMLFVAFGALVLVPLLTG-----------LDPNVALFGAGLGTLLFQLITRR 49
           MK    G Q +   FGA V VPL+ G           L     L   G+ TLL Q     
Sbjct: 1   MKRIALGFQHVLAMFGATVTVPLVVGYAIGLSMSEIALLLQAVLLAMGVATLL-QTFAGS 59

Query: 50  SVPIFLASSFAFIAPIMFGIQTWGIPATMGGLMAAGAVYIVLGGIIKVRGVAIIHKLLPP 109
             PI   SSFAFI  ++      G+ A  G L+  G +  + G +  +     + KL  P
Sbjct: 60  RFPIVQGSSFAFIPGLIAVGSGMGLAAVEGALIIGGVIEAITGALGLI---GKLKKLFSP 116

Query: 110 VVVGPVIMVIGLGLAPAAVNMALGKTGDGSVQLVDPQAALWISCISLLVTVVFSVFAKGF 169
           +V G  IM+IG  LA  AV  +     D +   +    ++ ++ ++ + T++ S+  KG 
Sbjct: 117 IVTGVTIMLIGFSLADVAVQYSFNYFADPTGSSI--VTSILVAALTFITTILVSLQGKGT 174

Query: 170 FKLVPILAGIVSGYAVSLVMGVVSFAAVEQAAWLALPNFT---FPEFNINAILFMIPVAI 226
            K +P++ G V GY +S+ +G+V F+ + Q +W ALP       P F++NAI+ ++   +
Sbjct: 175 LKAMPVIIGAVVGYVISIFLGLVDFSMMNQLSWFALPKLMPWGMPVFDVNAIIILLFAFM 234

Query: 227 APAVEHVGDMLAISNVTNKDYLKKPGLHRTIAGDGVATMAATMLGAPPNTTYSEVTGAVM 286
              +E VGD  AIS + +   +    ++R IA +G +   A + GA   T+YSE  G V 
Sbjct: 235 VSIIESVGDYHAISTIADLK-IDDNKINRGIASEGFSCTLAGLFGACGTTSYSENIGLVA 293

Query: 287 LTRAFNPAIMTWAAITAIVLALVGKLGALLQTIPVPVMGGIMILLFGSIATVGLNTLIKN 346
           LT+  +  ++   A+  ++L+++ K   LL +IP PV+GG+   L+G I+  GL  LIK+
Sbjct: 294 LTKVSSVQVVQIGAVILVLLSMIPKFSGLLASIPAPVLGGLTTALYGMISITGLK-LIKD 352

Query: 347 QVDLHKSRNLVIVAVTLVFGIGGMAFGVGDFSL----------QGVSLCGIVAIVLNLVL 396
           +V+L+  RN +I+A  LV G+G         SL           G+++  I AI+++ +L
Sbjct: 353 KVELN-DRNTLILASALVLGLGAPQLPAEFLSLFPKIISSILESGMAVGAITAILMDQLL 411