Pairwise Alignments

Query, 417 a.a., uracil permease from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., uracil permease (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  585 bits (1507), Expect = e-171
 Identities = 290/393 (73%), Positives = 334/393 (84%)

Query: 5   IQGAQMLFVAFGALVLVPLLTGLDPNVALFGAGLGTLLFQLITRRSVPIFLASSFAFIAP 64
           +QGAQMLFVAFGALVL+PLLTGLD +VALF AG+GTLLFQLIT+R VPIFLASSFAFIAP
Sbjct: 8   LQGAQMLFVAFGALVLMPLLTGLDTSVALFTAGIGTLLFQLITKRQVPIFLASSFAFIAP 67

Query: 65  IMFGIQTWGIPATMGGLMAAGAVYIVLGGIIKVRGVAIIHKLLPPVVVGPVIMVIGLGLA 124
           I++G+QTWGIP+TMGG+MAAG VY+ LG ++KVRG   IHKLLPPVVVGPVI++IGLGLA
Sbjct: 68  ILYGVQTWGIPSTMGGIMAAGVVYVCLGALVKVRGTDFIHKLLPPVVVGPVIIIIGLGLA 127

Query: 125 PAAVNMALGKTGDGSVQLVDPQAALWISCISLLVTVVFSVFAKGFFKLVPILAGIVSGYA 184
           P AVNMALGK+GDGS+ LV    AL IS +SL  T+  ++FAKG  K++PILAGI+ GY 
Sbjct: 128 PVAVNMALGKSGDGSLALVPTNTALIISLVSLCTTIAVAIFAKGLLKVMPILAGIIVGYG 187

Query: 185 VSLVMGVVSFAAVEQAAWLALPNFTFPEFNINAILFMIPVAIAPAVEHVGDMLAISNVTN 244
           +SL  G+V F+ V  A W+A+P F  PEFN +AI FMIPVAIAPAVEH+GD+LAISNVT 
Sbjct: 188 LSLAFGIVDFSVVTAANWIAIPKFVAPEFNWHAIAFMIPVAIAPAVEHIGDILAISNVTG 247

Query: 245 KDYLKKPGLHRTIAGDGVATMAATMLGAPPNTTYSEVTGAVMLTRAFNPAIMTWAAITAI 304
           KD++KKPGLHRT+ GDGVAT+AA   G PPNTTYSEVTGAV LTR F+P IMTW AITAI
Sbjct: 248 KDFMKKPGLHRTLTGDGVATIAAAAFGGPPNTTYSEVTGAVTLTRNFDPRIMTWTAITAI 307

Query: 305 VLALVGKLGALLQTIPVPVMGGIMILLFGSIATVGLNTLIKNQVDLHKSRNLVIVAVTLV 364
            LA VGKLGAL+QTIPVPVMGGIM LLFGSIA VGLNTLI+N VDL + RNL IV VTLV
Sbjct: 308 TLAFVGKLGALMQTIPVPVMGGIMCLLFGSIAAVGLNTLIRNHVDLSEPRNLSIVGVTLV 367

Query: 365 FGIGGMAFGVGDFSLQGVSLCGIVAIVLNLVLP 397
           FGIGGMAFG+G FSL G+SLCGIVAI +NL+LP
Sbjct: 368 FGIGGMAFGIGSFSLTGISLCGIVAITMNLLLP 400