Pairwise Alignments

Query, 382 a.a., DUF2066 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  124 bits (310), Expect = 5e-33
 Identities = 85/299 (28%), Positives = 150/299 (50%), Gaps = 12/299 (4%)

Query: 24  LYQAEVAVDPQQSNADAAARVRGMEEVIVRATGSQDALKNDAVQKALRQSNQYITQISTQ 83
           L +A+V V  +      +A    +E+VI++ TG+  +L N  +Q  L      ++Q    
Sbjct: 31  LDEADVPVTSRAVPERNSALKTALEKVIIKNTGTARSLDNSVIQSQLANPEALLSQFGYV 90

Query: 84  QEGAQSVMRLQFSAQHIRSLLSQAQLPFWPESRSNLLVWLVEEANYDRSVSWEHADTPLL 143
           ++  Q +++  F  + I SLL QAQLP W   R   L W+   +  D  +    +D+  L
Sbjct: 91  EQNGQLLLKANFEHRRIVSLLRQAQLPVWGTQRPLTLFWVAMPSEGDTILL---SDSSSL 147

Query: 144 NQMKVRARI---RGLPLTVPVGDFDDVTGVQVSDLWGGFINPISIASQRYPTD--AVLVV 198
            + KV +     RG+P+ +P+ D D++ G+  +D+ G F + ++  S RY  D  A++ +
Sbjct: 148 AERKVFSTFSDERGIPVLLPILDLDELMGINPNDVKGMFADIVASVSGRYQADFLALMAI 207

Query: 199 RAQGSELRW--TLFDQLANTMVSQPKAPISGQA-SGEQAVTEMIDEISDYYARKSAVVVS 255
             +GS +R+   L+ +     ++ P    +G A +  QA+T M+  + DYY  K A+  S
Sbjct: 208 DPEGSRVRYRLNLYSKTTIDSLTPPLFTFNGSAENSAQAITAMMAALGDYYFTKYAIADS 267

Query: 256 SESSQSVLAQFSPLDSAQDFFVVENKLKRLSSVASLDILKVQGTQVTFNVHLLASVEEF 314
            E   + +  F  +D       VE  LK+LS+V +  + ++QG  VTF + L  S  +F
Sbjct: 268 GEQVGASVT-FVNIDKMAQVVEVEKYLKQLSAVKNATLSRIQGNTVTFTLDLFGSQTDF 325