Pairwise Alignments

Query, 484 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., Putative Zn-dependent protease, contains TPR repeats from Pseudomonas stutzeri RCH2

 Score =  258 bits (658), Expect = 4e-73
 Identities = 164/471 (34%), Positives = 249/471 (52%), Gaps = 13/471 (2%)

Query: 8   TLLCLCIAAPCLPAIAQNDPIELPDIGTVAGSTLTIDQELIYGDAYMRMLRNNQPVINDP 67
           TL CL +     PA+      +LP +G  +   ++ +QE + G A++ +LR     ++DP
Sbjct: 10  TLTCLFVQ----PALTN----DLPSLGDASSGIVSPEQEHLLGRAWLSLLRGQVRQLSDP 61

Query: 68  VLNEYIDNLGHRLVASANDVKTPFTFFMIRDRNINAFAFFGGYVALHSGLFLHAQSESEL 127
            L +Y++N  +RL  ++        F ++    +NAFA  GG + ++ GLF+HAQ+E+E 
Sbjct: 62  QLKDYVENSVYRLAETSQLQDRRLEFVLLDSPQLNAFAAPGGIIGVNGGLFIHAQTEAEY 121

Query: 128 ASVMAHEIAHVTQRHLARSMEEQARRS-PATIAALAGSLLLAIAAPEAGIAAINATMAGS 186
           ASVMAHE+AH++QRH AR +E Q R   P   A LAG +  A  A +AGIAAI +T A +
Sbjct: 122 ASVMAHELAHLSQRHFARGLEAQQRMQLPLMAAMLAGVVAAAAGAGDAGIAAIVSTQAAA 181

Query: 187 IQGQINYTRSNEKEADRFGIATLAKAGFDANAMPQFFTRLADEYRYASKPPPMLLTHPLP 246
           IQ Q  ++R NE+EADR GI  L +AG+D  AMP  F RL  +YRY  KPP  LLTHP+ 
Sbjct: 182 IQAQRRFSRQNEQEADRIGIVNLERAGYDPRAMPSMFGRLMRQYRYDQKPPEFLLTHPVS 241

Query: 247 EDRITDSRERARQYPPLKLAPHLDYHLARARIIARYAGIDADAALDWFARSEKKIDATLQ 306
           E RI D+  RA QYP       L Y L RAR   ++       A  + A   +  +    
Sbjct: 242 ESRIADTTNRAEQYPQGGAQDSLRYQLMRARTQLKFESTPGVEAKRFRAMLNENPE---M 298

Query: 307 PSIQYGKALVYLDLKQFDKAEPLLTQLVKEQPDNHFYLDAISDLYIELKQADKAQSLLEK 366
            + +YG AL  +   Q  +A   L  L+ + PD+  Y  A  +L I   +  +AQ+ L++
Sbjct: 299 DAARYGLALAQIKAGQLTEASSSLAPLLTKAPDDLTYNLAQVELDITSNRLQQAQTRLQR 358

Query: 367 ALKQTPNNSVLTINYANVLLKQDKFTDAIRILQRYTHDNPNDINGWQLLSEANSRLGNSA 426
            L+  P N  +   + ++L++Q +   A R L +       D + W  ++E     GN  
Sbjct: 359 LLQLYPGNYPVRQMHIDLLMEQGETQQAERELDKLAEQRRRDPDIWYQVAEVRGLSGNIV 418

Query: 427 EDLAARGEIMALQANWNKAIQFYTQASQLVELGSLAQARYDARIDQLMVQR 477
               AR E  AL  ++++ I+    A +      ++ AR DAR  QLM ++
Sbjct: 419 GLHQARAEYFALVGDYDQGIEQLNLAKRRASNFQIS-ARIDARQKQLMDEK 468